Factsheet for TraesCS3A01G479900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G073120.1	Barley	extracellular	85.89	89.54
HORVU3Hr1G105180.1	Barley	extracellular	85.89	89.54
TraesCS3A01G480000.1	Wheat	extracellular	87.46	86.92
HORVU3Hr1G073140.1	Barley	plastid	71.16	86.31
HORVU3Hr1G105170.1	Barley	plastid	71.16	86.31
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	42.01	83.23
TraesCS6A01G217100.1	Wheat	extracellular	73.35	78.79
Os03t0102700-01	Rice	plastid	64.58	73.84
KXG40416	Sorghum	extracellular, vacuole	70.22	70.0
TraesCS3A01G011200.1	Wheat	cytosol	34.8	69.38
TraesCS3A01G011100.1	Wheat	extracellular	59.56	69.34
Zm00001d027283_P001	Maize	extracellular	66.14	66.35
TraesCS6A01G032700.1	Wheat	extracellular	53.6	62.64
TraesCS1A01G212300.1	Wheat	extracellular	53.6	62.41
TraesCS1A01G212400.1	Wheat	extracellular	51.72	62.26
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	65.52	61.11
TraesCS1A01G212000.1	Wheat	extracellular	50.78	60.0
TraesCS1A01G212600.1	Wheat	extracellular	50.78	58.27
TraesCS1A01G212200.1	Wheat	extracellular	49.22	57.93
TraesCS5A01G538000.1	Wheat	extracellular	51.41	57.75
TraesCS1A01G208200.1	Wheat	extracellular	45.77	55.09
TraesCS2A01G458900.1	Wheat	extracellular	45.14	54.34
TraesCS2A01G413600.1	Wheat	extracellular	40.75	49.62
TraesCS2A01G081200.1	Wheat	extracellular	39.5	49.61
TraesCS2A01G580300.1	Wheat	extracellular	38.24	49.0
TraesCS2A01G080800.1	Wheat	extracellular	38.56	48.43
TraesCS5A01G530100.1	Wheat	extracellular	40.75	48.15
GSMUA_AchrUn_...	Banana	extracellular	13.79	47.83
TraesCS2A01G580200.1	Wheat	extracellular	37.62	47.81
TraesCS5A01G530700.1	Wheat	extracellular	40.44	47.78
TraesCS2A01G413400.1	Wheat	extracellular	38.56	47.13
TraesCS6A01G249200.1	Wheat	extracellular	41.38	45.99
TraesCS6A01G249700.1	Wheat	extracellular	38.24	45.86
TraesCS6A01G249400.2	Wheat	extracellular	37.93	45.66
TraesCS2A01G105200.1	Wheat	extracellular	36.05	45.28
TraesCS6A01G249300.1	Wheat	extracellular	40.44	44.64
TraesCS3A01G488000.1	Wheat	extracellular	38.87	42.91
TraesCS2A01G413500.1	Wheat	extracellular, plastid	36.99	41.99
TraesCS6A01G235800.1	Wheat	extracellular	31.97	38.2
TraesCS2A01G373000.1	Wheat	extracellular	31.03	35.23
TraesCS5A01G498900.1	Wheat	extracellular	24.45	28.36
TraesCS5A01G499300.1	Wheat	nucleus	24.14	28.21
TraesCS5A01G499200.1	Wheat	extracellular	22.26	27.0
TraesCS5A01G499100.1	Wheat	extracellular	21.0	26.8
TraesCS1A01G203200.1	Wheat	extracellular	23.2	26.24
TraesCS7A01G545900.1	Wheat	extracellular	21.94	22.65
TraesCS7A01G545800.1	Wheat	extracellular	21.0	22.26
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	21.32	21.18
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	21.32	21.05

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G479900	EnsemblPlants:TraesCS3A01G479900.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:+:711202911..711203961

Molecular Weight (calculated)

33612.5 Da

IEP (calculated)

4.757

GRAVY (calculated)

-0.255

Length

319 amino acids

Sequence
(BLAST)

001: MATASSYVLA VALLCLLASD GCCGCPWFLP GTFCPGPTPE PTPTPNPVPA TPAPAPATPS PGPITPPPAP ATPSPGYGSG STNGSTSGWL DARATWYGAP
101: DGAGPDDNGG ACGFKNVNLP PFNAMTSCGN EPLFKDGKGC GSCYQIRCVG KTHPACSGVP ETVIITDMNY YPVPRYHFDL SGTAFGAMAK DGRNDELRHA
201: GIIDMQFKRV PCQYTGMSLT FHVEKGSNPN YLAILVEYGN GDGDVAQVDL MDGGEPTVAW RPMRESWGSI WRLDTRRPLR GPFSLRVTNG SGRSLVADQV
301: IPADWQADAV YSSAVQFDD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.