Factsheet for TraesCS7A01G546000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	87.31	88.4
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	83.59	87.66
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	84.21	84.74
TraesCS7A01G545800.1	Wheat	extracellular	65.63	70.43
TraesCS7A01G545900.1	Wheat	extracellular	66.56	69.58
Os06t0725300-01	Rice	endoplasmic reticulum	52.32	53.99
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	45.2	45.77
KRH24119	Soybean	extracellular	35.91	44.44
KRH29091	Soybean	extracellular	35.6	44.4
GSMUA_Achr11P...	Banana	extracellular	36.53	44.36
TraesCS5A01G498900.1	Wheat	extracellular	37.15	43.64
TraesCS5A01G499300.1	Wheat	nucleus	36.84	43.59
TraesCS5A01G499100.1	Wheat	extracellular	32.82	42.4
GSMUA_Achr11P...	Banana	extracellular	34.67	42.26
GSMUA_AchrUn_...	Banana	extracellular	24.46	42.02
TraesCS1A01G203200.1	Wheat	extracellular	36.53	41.84
GSMUA_Achr5P19030_001	Banana	extracellular	33.44	40.91
Solyc01g112000.2.1	Tomato	extracellular	32.82	40.61
CDY69288	Canola	extracellular	33.13	40.53
Bra033563.1-P	Field mustard	extracellular	33.13	40.53
TraesCS5A01G499200.1	Wheat	extracellular	32.82	40.3
VIT_03s0038g03430.t01	Wine grape	extracellular	31.89	39.77
CDY72634	Canola	extracellular	32.51	39.62
CDY64278	Canola	extracellular	32.51	39.62
PGSC0003DMT400047948	Potato	extracellular	31.89	39.62
GSMUA_Achr5P11590_001	Banana	extracellular	31.89	39.46
CDY52801	Canola	extracellular	32.82	39.41
Bra011899.1-P	Field mustard	extracellular	32.51	39.03
CDY61895	Canola	extracellular	32.51	39.03
AT4G38400.1	Thale cress	extracellular	31.58	38.49
AT3G45960.2	Thale cress	extracellular	30.65	37.64
AT3G45970.1	Thale cress	extracellular	30.34	36.98
KXG20919	Sorghum	plastid	48.92	35.67
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	32.51	34.2
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	14.24	28.57
TraesCS2A01G080800.1	Wheat	extracellular	21.05	26.77
TraesCS2A01G081200.1	Wheat	extracellular	21.05	26.77
TraesCS2A01G105200.1	Wheat	extracellular	21.05	26.77
TraesCS6A01G235800.1	Wheat	extracellular	21.98	26.59
TraesCS2A01G413400.1	Wheat	extracellular	21.05	26.05
TraesCS6A01G249400.2	Wheat	extracellular	21.36	26.04
TraesCS6A01G249700.1	Wheat	extracellular	21.05	25.56
TraesCS2A01G580300.1	Wheat	extracellular	19.5	25.3
TraesCS2A01G373000.1	Wheat	extracellular	21.98	25.27
TraesCS3A01G011200.1	Wheat	cytosol	12.38	25.0
TraesCS2A01G413600.1	Wheat	extracellular	19.81	24.43
TraesCS2A01G580200.1	Wheat	extracellular	18.89	24.3
TraesCS2A01G458900.1	Wheat	extracellular	19.5	23.77
TraesCS2A01G413500.1	Wheat	extracellular, plastid	20.43	23.49
TraesCS6A01G249200.1	Wheat	extracellular	20.12	22.65
TraesCS1A01G212300.1	Wheat	extracellular	18.89	22.26
TraesCS1A01G212000.1	Wheat	extracellular	18.58	22.22
TraesCS1A01G208200.1	Wheat	extracellular	17.96	21.89
TraesCS1A01G212400.1	Wheat	extracellular	17.96	21.89
TraesCS6A01G249300.1	Wheat	extracellular	19.5	21.8
TraesCS3A01G488000.1	Wheat	extracellular	19.2	21.45
TraesCS1A01G212200.1	Wheat	extracellular	17.96	21.4
TraesCS3A01G479900.1	Wheat	extracellular	21.05	21.32
TraesCS6A01G032700.1	Wheat	extracellular	17.65	20.88
TraesCS6A01G217100.1	Wheat	extracellular	18.89	20.54
TraesCS3A01G011100.1	Wheat	extracellular	17.34	20.44
TraesCS3A01G480000.1	Wheat	extracellular	20.12	20.25
TraesCS1A01G212600.1	Wheat	extracellular	17.03	19.78
TraesCS5A01G530700.1	Wheat	extracellular	16.41	19.63
TraesCS5A01G530100.1	Wheat	extracellular	16.41	19.63
TraesCS5A01G538000.1	Wheat	extracellular	17.03	19.37
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	18.89	17.84

Protein Annotations

EnsemblPlants:TraesCS7A01G546000.1	EnsemblPlantsGene:TraesCS7A01G546000	Gene3D:2.40.40.10	Gene3D:2.60.40.760	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:RlpA-like_sf
PANTHER:PTHR31692	PANTHER:PTHR31692:SF25	PFAM:PF01357	PFscan:PS50842	PFscan:PS50843	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF49590	SUPFAM:SSF50685	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr7A:+:721818308..721819279

Molecular Weight (calculated)

33800.2 Da

IEP (calculated)

8.191

GRAVY (calculated)

-0.028

Length

323 amino acids

Sequence
(BLAST)

001: MAALPQLLLT LFPAAAAVLI LLLASAPAAR ASSATYRCGW CPRRSTASIL PPDAGALTGA ACGYGGPAAA ETAVDEGFHI AAVSAGFFRG GRACGACYQL
101: RCRGRSACAK DGVKVVVVGE VPDTNKTEAG RFLLTKDTFA AMATPDRGAE LADAALDVDF RRIPCVYKSK NLAVKVEETS SRDQGYLALR FLYQGGQTDI
201: AAVEVAQAVT GSSGTNSDAA PLPTSWQYMT RREASPSVWR TSRVPAGPLR LRLVVTAGSG GKWLRADWAV LPAEWQPGEV YDTGLRVTDV AANTCGGASC
301: SATDEGDDAP MTRSPCMRPR MSQ

Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)

001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.