Factsheet for TraesCS3A01G011100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G000500.1	Wheat	extracellular	93.8	93.8
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	92.7	92.7
HORVU3Hr1G001920.2	Barley	extracellular	89.05	86.83
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	49.27	83.85
TraesCS3A01G011200.1	Wheat	cytosol	47.45	81.25
Os03t0102700-01	Rice	plastid	70.8	69.53
TraesCS6A01G217100.1	Wheat	extracellular	74.09	68.35
TraesCS1A01G212400.1	Wheat	extracellular	62.41	64.53
KXG40416	Sorghum	extracellular, vacuole	74.09	63.44
Zm00001d027283_P001	Maize	extracellular	72.99	62.89
TraesCS1A01G212000.1	Wheat	extracellular	61.68	62.59
TraesCS1A01G212300.1	Wheat	extracellular	62.41	62.41
TraesCS6A01G032700.1	Wheat	extracellular	61.31	61.54
TraesCS3A01G480000.1	Wheat	extracellular	71.17	60.75
TraesCS3A01G479900.1	Wheat	extracellular	69.34	59.56
TraesCS5A01G538000.1	Wheat	extracellular	59.85	57.75
TraesCS1A01G212600.1	Wheat	extracellular	58.03	57.19
TraesCS1A01G212200.1	Wheat	extracellular	56.2	56.83
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	70.44	56.43
TraesCS1A01G208200.1	Wheat	extracellular	51.46	53.21
TraesCS2A01G458900.1	Wheat	extracellular	47.81	49.43
TraesCS2A01G580300.1	Wheat	extracellular	44.89	49.4
TraesCS2A01G081200.1	Wheat	extracellular	44.89	48.43
TraesCS2A01G413400.1	Wheat	extracellular	45.62	47.89
TraesCS2A01G580200.1	Wheat	extracellular	43.8	47.81
TraesCS5A01G530100.1	Wheat	extracellular	47.08	47.78
TraesCS2A01G413600.1	Wheat	extracellular	45.62	47.71
TraesCS2A01G080800.1	Wheat	extracellular	44.16	47.64
TraesCS5A01G530700.1	Wheat	extracellular	46.72	47.41
TraesCS6A01G249400.2	Wheat	extracellular	45.62	47.17
TraesCS6A01G249700.1	Wheat	extracellular	45.62	46.99
TraesCS2A01G105200.1	Wheat	extracellular	40.88	44.09
GSMUA_AchrUn_...	Banana	extracellular	14.6	43.48
TraesCS6A01G249300.1	Wheat	extracellular	45.26	42.91
TraesCS6A01G249200.1	Wheat	extracellular	44.89	42.86
TraesCS2A01G413500.1	Wheat	extracellular, plastid	43.43	42.35
TraesCS3A01G488000.1	Wheat	extracellular	43.07	40.83
TraesCS6A01G235800.1	Wheat	extracellular	37.96	38.95
TraesCS2A01G373000.1	Wheat	extracellular	36.5	35.59
TraesCS5A01G498900.1	Wheat	extracellular	25.91	25.82
TraesCS5A01G499300.1	Wheat	nucleus	24.45	24.54
TraesCS5A01G499200.1	Wheat	extracellular	23.36	24.33
TraesCS5A01G499100.1	Wheat	extracellular	21.9	24.0
TraesCS1A01G203200.1	Wheat	extracellular	23.72	23.05
TraesCS7A01G545900.1	Wheat	extracellular	21.53	19.09
TraesCS7A01G545800.1	Wheat	extracellular	20.44	18.6
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	20.44	17.45
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	20.44	17.34

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G011100	EnsemblPlants:TraesCS3A01G011100.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:+:9110192..9112263

Molecular Weight (calculated)

29823.4 Da

IEP (calculated)

7.353

GRAVY (calculated)

-0.295

Length

274 amino acids

Sequence
(BLAST)

001: MASSSVAVAA ALILVSHAYG CYAKHHAFPA VANSSWLDAK ATWYGAPHGA GPDDNGGACG FKNVNLPPFS SMTSCGNQPL FKDGKGCGSC YQIRCLKSDH
101: PACSGVPKTV IITDMNYYPV SRYHFDLSGT AFGAMAKDGR NDELRHAGMI NMQFKRVPCH YPGLTVTFHV EDGSNPFYMA ILVEYEDGDG DVKQLDIMES
201: RPGAVSGGKM APTGQWVPMK ESWGSIWRMD AHHPMQGPFS LRVTNESGKT LVAEQVIPID WKPNKTYSSH VQFH

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.