Factsheet for HORVU3Hr1G001920.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G000500.1	Wheat	extracellular	89.32	91.61
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	88.26	90.51
TraesCS3A01G011100.1	Wheat	extracellular	86.83	89.05
HORVU6Hr1G055090.1	Barley	extracellular	72.24	75.75
HORVU3Hr1G105170.1	Barley	plastid	66.19	70.72
HORVU3Hr1G073140.1	Barley	plastid	66.19	70.72
Os03t0102700-01	Rice	plastid	69.04	69.53
HORVU3Hr1G105180.1	Barley	extracellular	70.46	64.71
HORVU3Hr1G073120.1	Barley	extracellular	70.46	64.71
KXG40416	Sorghum	extracellular, vacuole	72.24	63.44
Zm00001d027283_P001	Maize	extracellular	71.53	63.21
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	30.61	62.32
HORVU3Hr1G105520.1	Barley	extracellular	70.11	57.1
HORVU6Hr1G005760.1	Barley	extracellular	57.65	56.84
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	70.82	56.37
HORVU4Hr1G088080.4	Barley	plastid	80.07	55.83
HORVU6Hr1G005810.3	Barley	extracellular	60.14	55.78
HORVU1Hr1G054210.1	Barley	extracellular	52.31	54.24
HORVU1Hr1G054240.2	Barley	plastid	59.43	52.68
HORVU4Hr1G086830.1	Barley	extracellular	47.33	50.0
HORVU1Hr1G053300.1	Barley	extracellular	48.75	49.46
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	41.28	48.95
HORVU0Hr1G005490.1	Barley	extracellular	48.75	47.9
HORVU2Hr1G013360.1	Barley	extracellular	41.99	47.01
HORVU0Hr1G016380.2	Barley	extracellular	44.13	46.79
HORVU4Hr1G086930.1	Barley	extracellular	45.2	46.35
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	45.91	45.91
HORVU2Hr1G097480.1	Barley	extracellular	45.2	44.88
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	43.77	44.24
GSMUA_AchrUn_...	Banana	extracellular	13.88	42.39
HORVU0Hr1G018320.1	Barley	extracellular	43.42	42.21
HORVU6Hr1G063180.1	Barley	extracellular	42.35	41.46
HORVU0Hr1G016410.1	Barley	extracellular	42.35	41.46
HORVU6Hr1G060410.7	Barley	extracellular	35.94	37.69
HORVU4Hr1G088140.3	Barley	extracellular	43.06	37.58
HORVU2Hr1G013340.1	Barley	extracellular	38.79	37.33
HORVU2Hr1G097490.1	Barley	plastid	40.57	36.66
HORVU5Hr1G092910.9	Barley	plastid	42.7	28.99
HORVU4Hr1G081990.2	Barley	extracellular	26.33	26.43
HORVU1Hr1G052290.4	Barley	extracellular	23.49	23.83
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	24.2	22.74
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	20.64	18.77
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	21.0	18.67
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	19.93	17.89

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A287JWD0	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150
GO:GO:0019953	EnsemblPlantsGene:HORVU3Hr1G001920	EnsemblPlants:HORVU3Hr1G001920.2	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000B48719E	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:3976423..3977874

Molecular Weight (calculated)

30509.1 Da

IEP (calculated)

7.281

GRAVY (calculated)

-0.348

Length

281 amino acids

Sequence
(BLAST)

001: SESAMASSSS AVVAALILCI LIAHGHGCFA KHQTPHPAAN SSWLDAKATW YGRPTGAGPD DNGGACGFKN VNLPPFSSMT SCGNQPLFKD GKGCGSCYQI
101: RCLNSDHPAC SGVPKTVIIT DMNYDPVSRY HFDLSGTAFG AMAKYGRNDE LRHAGIINMQ FKRVPCQYPG LTVTFHVEEG SNPFYMAILV EYENGDGDVK
201: QLDIMESRPG ATNGGKMTPT GEWVPMKESW GSIWRMDAHH PMRGPFSLRV TNESGKTLVA DQVIPGDWKP NKTYSSLVQF H

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.