Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G016410.1 | Barley | extracellular | 100.0 | 100.0 |
| TraesCS6A01G249200.1 | Wheat | extracellular | 94.08 | 94.08 |
| TraesCS6D01G231200.1 | Wheat | extracellular | 93.38 | 93.38 |
| TraesCS6B01G275800.1 | Wheat | extracellular | 93.38 | 93.38 |
| Os02t0658800-01 | Rice | extracellular | 77.7 | 76.37 |
| HORVU0Hr1G018320.1 | Barley | extracellular | 72.47 | 71.97 |
| EER98447 | Sorghum | extracellular | 69.34 | 64.82 |
| Zm00001d019560_P001 | Maize | plasma membrane | 69.34 | 64.61 |
| EER98449 | Sorghum | extracellular | 68.64 | 63.14 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 55.05 | 59.62 |
| Zm00001d019557_P001 | Maize | extracellular, plastid | 58.88 | 58.48 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 47.04 | 56.96 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 47.04 | 53.78 |
| HORVU2Hr1G097510.1 | Barley | extracellular, mitochondrion, plastid | 51.92 | 53.6 |
| HORVU2Hr1G097490.1 | Barley | plastid | 57.49 | 53.05 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 50.52 | 51.24 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 46.69 | 45.89 |
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 21.6 | 44.93 |
| HORVU6Hr1G055090.1 | Barley | extracellular | 41.46 | 44.4 |
| HORVU3Hr1G073140.1 | Barley | plastid | 40.42 | 44.11 |
| HORVU3Hr1G105170.1 | Barley | plastid | 40.42 | 44.11 |
| HORVU3Hr1G001920.2 | Barley | extracellular | 41.46 | 42.35 |
| HORVU1Hr1G054210.1 | Barley | extracellular | 39.02 | 41.33 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 37.98 | 40.67 |
| HORVU1Hr1G054240.2 | Barley | plastid | 44.6 | 40.38 |
| HORVU6Hr1G005760.1 | Barley | extracellular | 40.07 | 40.35 |
| HORVU6Hr1G005810.3 | Barley | extracellular | 42.51 | 40.26 |
| HORVU3Hr1G105180.1 | Barley | extracellular | 42.51 | 39.87 |
| HORVU3Hr1G073120.1 | Barley | extracellular | 42.51 | 39.87 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 36.59 | 39.47 |
| HORVU1Hr1G053300.1 | Barley | extracellular | 37.98 | 39.35 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 36.24 | 37.96 |
| HORVU0Hr1G005490.1 | Barley | extracellular | 36.59 | 36.71 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 35.89 | 36.65 |
| HORVU5Hr1G019100.1 | Barley | extracellular, plasma membrane | 44.95 | 36.54 |
| HORVU3Hr1G105520.1 | Barley | extracellular | 42.86 | 35.65 |
| HORVU5Hr1G092910.9 | Barley | plastid | 48.43 | 33.57 |
| HORVU4Hr1G088140.3 | Barley | extracellular | 32.75 | 29.19 |
| HORVU4Hr1G088080.4 | Barley | plastid | 39.72 | 28.29 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 26.48 | 27.14 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 25.78 | 26.71 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 27.18 | 26.09 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 22.65 | 21.04 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 23.0 | 20.89 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 21.6 | 19.81 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| EnsemblPlantsGene:HORVU6Hr1G063180 | EnsemblPlants:HORVU6Hr1G063180.1 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| InterPro:LolPI | UniProt:M0UM32 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF50 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000295AA97 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:425269013..425270632
Molecular Weight (calculated)
30077.0 Da
IEP (calculated)
8.529
GRAVY (calculated)
-0.103
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSFTSLAL LSALVMLSLF VSPIACSRKL PKPAMKVHKN HTAATPSSFA AYGSGGWSAG GATYYGAPDG DGSDGGACGY QSAVGNRPFS SMIAAGNPSL
101: YRGGKGCGAC YEVKCTGNQA CSGQPATVVI TDECPGGAAC LGEAAHFDMS GTSMGAMAKP GMADKLRASG IVKIQYKRVP CKYPGMNIAF KVDQGSNPFY
201: LEVLIEFEDD DGDLNTVDLM EANCGTWTPM VQNWGALYRL NSNTGKPLRG PFSLRLTSDS GRKLVVNNVI PVSWKAGATY RSLVNYP
101: YRGGKGCGAC YEVKCTGNQA CSGQPATVVI TDECPGGAAC LGEAAHFDMS GTSMGAMAKP GMADKLRASG IVKIQYKRVP CKYPGMNIAF KVDQGSNPFY
201: LEVLIEFEDD DGDLNTVDLM EANCGTWTPM VQNWGALYRL NSNTGKPLRG PFSLRLTSDS GRKLVVNNVI PVSWKAGATY RSLVNYP
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.