Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 43.51 | 89.86 |
| HORVU6Hr1G005810.3 | Barley | extracellular | 84.21 | 79.21 |
| HORVU1Hr1G054210.1 | Barley | extracellular | 69.47 | 73.06 |
| HORVU3Hr1G073140.1 | Barley | plastid | 58.25 | 63.12 |
| HORVU3Hr1G105170.1 | Barley | plastid | 58.25 | 63.12 |
| HORVU6Hr1G055090.1 | Barley | extracellular | 59.3 | 63.06 |
| HORVU3Hr1G001920.2 | Barley | extracellular | 56.84 | 57.65 |
| HORVU3Hr1G073120.1 | Barley | extracellular | 58.6 | 54.58 |
| HORVU3Hr1G105180.1 | Barley | extracellular | 58.6 | 54.58 |
| HORVU1Hr1G054240.2 | Barley | plastid | 57.54 | 51.73 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 42.11 | 50.63 |
| HORVU3Hr1G105520.1 | Barley | extracellular | 58.95 | 48.7 |
| HORVU1Hr1G053300.1 | Barley | extracellular | 46.67 | 48.01 |
| GSMUA_AchrUn_... | Banana | extracellular | 15.44 | 47.83 |
| HORVU5Hr1G019100.1 | Barley | extracellular, plasma membrane | 58.95 | 47.59 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 43.16 | 46.24 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 40.35 | 45.82 |
| HORVU0Hr1G005490.1 | Barley | extracellular | 45.61 | 45.45 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 41.75 | 44.91 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 44.56 | 44.88 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 42.81 | 44.53 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 43.16 | 43.77 |
| HORVU2Hr1G097510.1 | Barley | extracellular, mitochondrion, plastid | 42.11 | 43.17 |
| HORVU4Hr1G088080.4 | Barley | plastid | 59.3 | 41.94 |
| HORVU6Hr1G063180.1 | Barley | extracellular | 40.35 | 40.07 |
| HORVU0Hr1G016410.1 | Barley | extracellular | 40.35 | 40.07 |
| HORVU0Hr1G018320.1 | Barley | extracellular | 39.3 | 38.75 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 37.54 | 36.64 |
| HORVU2Hr1G097490.1 | Barley | plastid | 37.89 | 34.73 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 32.63 | 34.7 |
| HORVU4Hr1G088140.3 | Barley | extracellular | 38.95 | 34.47 |
| HORVU5Hr1G092910.9 | Barley | plastid | 41.75 | 28.74 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 23.51 | 23.93 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 20.7 | 21.3 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 22.11 | 21.07 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 19.65 | 18.12 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 19.65 | 17.72 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 18.95 | 17.25 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A287T813 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0019953 | EnsemblPlantsGene:HORVU6Hr1G005760 | EnsemblPlants:HORVU6Hr1G005760.1 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF19 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | UniParc:UPI000B486FDF | SEG:seg | : |
Description
No Description!
Coordinates
chrchr6H:+:12751029..12752051
Molecular Weight (calculated)
27864.2 Da
IEP (calculated)
9.447
GRAVY (calculated)
-0.292
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: ISCPIGFIFX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXTSAARSY NSGWLPAKAT WYGAPTGAGP MDNGGACGFK NVNKYPFSSM TSCGNEPLFD
101: GGAGCGSCYE IRCVAANNPS CSGQPRTVVI TDMNYYPVAR YHFDLSGTAF GAMAKYGLND KLRHAGIIDM QFRRVRCNFP GMKVTFHVQR GSNPNYLAVL
201: VEYANVDGTV VRMELMQTRN GRKTGYWEPM RRSWGSIWRM DTSRGLQGPF SMRITSDSGK TLVANNVIPA YWQQDKAYWS NVQFY
101: GGAGCGSCYE IRCVAANNPS CSGQPRTVVI TDMNYYPVAR YHFDLSGTAF GAMAKYGLND KLRHAGIIDM QFRRVRCNFP GMKVTFHVQR GSNPNYLAVL
201: VEYANVDGTV VRMELMQTRN GRKTGYWEPM RRSWGSIWRM DTSRGLQGPF SMRITSDSGK TLVANNVIPA YWQQDKAYWS NVQFY
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.