Factsheet for Os02t0658800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07508	Sorghum	extracellular	84.93	84.35
EES05780	Sorghum	extracellular	83.9	83.05
Zm00001d017495_P001	Maize	extracellular	82.88	82.31
Zm00001d017494_P001	Maize	extracellular	82.88	81.76
TraesCS6A01G249200.1	Wheat	extracellular	76.71	78.05
HORVU6Hr1G063180.1	Barley	extracellular	76.37	77.7
HORVU0Hr1G016410.1	Barley	extracellular	76.37	77.7
TraesCS6D01G231200.1	Wheat	extracellular	76.37	77.7
TraesCS6B01G275800.1	Wheat	extracellular	76.03	77.35
TraesCS6D01G231300.1	Wheat	extracellular	70.55	71.28
TraesCS6A01G249300.1	Wheat	extracellular	70.55	71.28
TraesCS6B01G275700.1	Wheat	extracellular	68.84	69.55
TraesCS3D01G482800.1	Wheat	extracellular	68.15	69.1
HORVU0Hr1G018320.1	Barley	extracellular	68.15	68.86
TraesCS3B01G535800.1	Wheat	extracellular	67.12	67.82
TraesCS3A01G488000.1	Wheat	extracellular	66.44	67.13
Os04t0552200-00	Rice	plasma membrane	56.85	60.36
Os04t0552000-00	Rice	extracellular	54.45	60.23
Os05t0246300-01	Rice	extracellular	54.11	59.85
Os02t0658600-00	Rice	plastid	55.14	58.97
Os10t0555900-02	Rice	extracellular	45.89	50.0
Os10t0555600-01	Rice	extracellular	46.92	49.82
Os03t0102500-01	Rice	extracellular	44.18	46.74
Os10t0548600-01	Rice	plasma membrane	42.81	46.47
Os10t0555700-02	Rice	extracellular	40.75	45.59
Os03t0645000-00	Rice	mitochondrion	48.63	45.37
Os10t0556100-01	Rice	extracellular	43.84	44.76
Os03t0106800-01	Rice	plasma membrane	40.41	44.19
Os03t0102700-01	Rice	plastid	41.78	43.73
Os02t0639500-01	Rice	extracellular	38.01	42.53
Os03t0106900-00	Rice	extracellular	38.36	41.95
Os03t0106500-01	Rice	plasma membrane	38.36	41.95
Os03t0106700-00	Rice	extracellular	30.82	39.47
Os07t0496250-01	Rice	extracellular	26.71	30.47
Os03t0132200-01	Rice	extracellular, plastid	27.05	28.32
Os10t0542400-01	Rice	extracellular	25.68	27.27
Os07t0475400-01	Rice	extracellular	25.68	27.17
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	25.34	22.91
Os06t0725300-01	Rice	endoplasmic reticulum	22.26	20.77

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:4330213	ProteinID:AAL24473.1	EMBL:AK059638
EMBL:AY046927	ProteinID:BAD25736.1	ProteinID:BAD25773.1	ProteinID:BAF09552.1	ProteinID:BAS80126.1	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0019953	GO:GO:0030312	GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	EnsemblPlantsGene:Os02g0658800	EnsemblPlants:Os02t0658800-01	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF8
UniProt:Q6H676	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00003B4536	RefSeq:XP_015623786.1	SEG:seg	:

Description

BETA-EXPANSIN 11Beta-expansin. (Os02t0658800-01)

Coordinates

chr2:+:26648837..26650582

Molecular Weight (calculated)

30501.8 Da

IEP (calculated)

9.101

GRAVY (calculated)

0.001

Length

292 amino acids

Sequence
(BLAST)

001: MAKSCTLVLL LVALVGLSLL VSPIACSRKL SKPKPKPKPS MKKPVVRAHN NYTGSPSVTV TTGWAAAGAT YYGAPNGDGS DGGACGYQTA VGQRPFSSMI
101: AAGSPSLYKG GKGCGACYEV KCTTNAACSG QPATVVITDE CPGGICLAGA AHFDMSGTSM GAMAKPGMAD KLRAAGILQV QYRRVPCKYS GVNIAFRVDQ
201: GANPFYFEVL IEFEDGDGDL NAVDLMEAGC GWTPMVQNWG ALWRYNSNTG KALKAPFSLR LTSDSGKVLV ANNVIPASWK PGVTYRSLVN YS

Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)

001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF

Arabidopsis Description

EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.