Factsheet for Zm00001d017494_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017495_P001	Maize	extracellular	87.5	88.1
Os02t0658800-01	Rice	extracellular	81.76	82.88
Zm00001d019560_P001	Maize	plasma membrane	69.26	66.56
Zm00001d026171_P001	Maize	extracellular	43.58	66.15
Zm00001d017493_P001	Maize	extracellular	54.05	59.93
Zm00001d026170_P001	Maize	extracellular	52.36	59.16
Zm00001d026169_P001	Maize	extracellular	57.77	58.56
Zm00001d051368_P001	Maize	extracellular	30.41	56.96
Zm00001d019557_P001	Maize	extracellular, plastid	55.41	56.75
Zm00001d045861_P001	Maize	mitochondrion	50.0	55.85
Zm00001d045792_P001	Maize	extracellular	50.0	54.81
Zm00001d029906_P001	Maize	extracellular	46.96	51.87
Zm00001d047090_P002	Maize	extracellular	46.28	50.74
Zm00001d029903_P002	Maize	extracellular	45.61	50.56
Zm00001d047089_P001	Maize	extracellular	44.93	49.81
Zm00001d047093_P001	Maize	extracellular	43.58	48.86
Zm00001d027281_P001	Maize	extracellular	41.89	45.42
Zm00001d017736_P001	Maize	cytosol	29.39	45.08
Zm00001d017740_P001	Maize	extracellular	38.51	45.06
Zm00001d017735_P001	Maize	extracellular	38.51	45.06
Zm00001d047091_P001	Maize	extracellular	41.22	44.69
Zm00001d029899_P001	Maize	extracellular, mitochondrion	42.23	44.33
Zm00001d047135_P011	Maize	extracellular	40.2	44.24
Zm00001d047087_P001	Maize	extracellular	42.57	44.06
Zm00001d029907_P001	Maize	extracellular	40.54	43.96
Zm00001d047142_P001	Maize	extracellular	39.86	43.87
Zm00001d047146_P001	Maize	extracellular	39.86	43.87
Zm00001d047147_P001	Maize	extracellular	39.86	43.87
Zm00001d017741_P001	Maize	extracellular	23.31	43.4
Zm00001d017737_P001	Maize	extracellular	39.53	43.33
Zm00001d029913_P001	Maize	extracellular	40.2	43.12
Zm00001d017732_P001	Maize	extracellular	39.19	42.96
Zm00001d047094_P001	Maize	extracellular	40.2	42.65
Zm00001d017733_P001	Maize	extracellular	38.85	42.59
Zm00001d017377_P001	Maize	extracellular	38.51	42.54
Zm00001d040609_P001	Maize	extracellular	38.51	42.38
Zm00001d048384_P001	Maize	extracellular	38.51	42.38
Zm00001d040608_P001	Maize	extracellular	38.18	42.16
Zm00001d047096_P001	Maize	extracellular	39.86	41.84
Zm00001d017731_P001	Maize	extracellular	32.09	40.77
Zm00001d004586_P001	Maize	extracellular	42.23	39.94
Zm00001d027283_P001	Maize	extracellular	41.89	38.99
Zm00001d029827_P001	Maize	extracellular	29.73	38.26
Zm00001d002860_P002	Maize	extracellular	39.19	38.03
Zm00001d027520_P001	Maize	extracellular	26.69	28.42
Zm00001d029783_P003	Maize	extracellular	26.35	28.36
Zm00001d048344_P002	Maize	extracellular	25.34	27.37
Zm00001d006360_P001	Maize	extracellular	25.0	27.21
Zm00001d017734_P001	Maize	cytosol	38.85	25.11
Zm00001d033231_P003	Maize	extracellular	48.31	20.03
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	20.95	19.44

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	ProteinID:AQK73264.1	UniProt:B4FRM9	EMBL:BT039767
EMBL:BT065150	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF50	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00017B75DD	EnsemblPlantsGene:Zm00001d017494	EnsemblPlants:Zm00001d017494_P001	EnsemblPlants:Zm00001d017494_T001	SEG:seg	:

Description

Expansin-B4

Coordinates

chr5:+:197532011..197533798

Molecular Weight (calculated)

31028.0 Da

IEP (calculated)

8.591

GRAVY (calculated)

-0.067

Length

296 amino acids

Sequence
(BLAST)

001: MAKSCTLLFG TVLVVLLLLV SPIACSRKLA KPTNKHRPRH KPAAVRARSN HTATPSVSDA YGSGGWLSAG ATYYGAPDGD GSDGGACGYQ TAVGQRPFSS
101: MIAAGSPSLF KEGKGCGACY EVKCDSNAAC SGKPATVVIT DECPGGVCLA EAAHFDMSGT SMGAMAKPGM ADRLRASGIL KVQYKRVPCK YSGVNIAFRV
201: DQGSNPFYFE VLVEFEDGDG DLSAVDLMEA GCGTWTPMVQ NWGALWRYNS NSGKALSAPF SLRLTSDSGK VLVASNVIPA SWKAGGTYRS LVNYYP

Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)

001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF

Arabidopsis Description

EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.