Factsheet for Zm00001d029899_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94500	Sorghum	extracellular	95.74	93.1
Zm00001d047087_P001	Maize	extracellular	92.55	91.26
Os10t0556100-01	Rice	extracellular	87.23	86.01
TraesCS1A01G212600.1	Wheat	extracellular	78.72	79.86
Zm00001d027281_P001	Maize	extracellular	70.57	72.89
TraesCS1B01G226100.1	Wheat	extracellular	78.37	70.83
TraesCS1D01G215500.1	Wheat	extracellular	78.72	70.48
Zm00001d029903_P002	Maize	extracellular	63.83	67.42
Zm00001d029906_P001	Maize	extracellular	63.12	66.42
Zm00001d047089_P001	Maize	extracellular	62.77	66.29
Zm00001d047090_P002	Maize	extracellular	63.12	65.93
Zm00001d047093_P001	Maize	extracellular	59.22	63.26
Zm00001d047091_P001	Maize	extracellular	58.51	60.44
Zm00001d029907_P001	Maize	extracellular	58.51	60.44
Zm00001d029913_P001	Maize	extracellular	58.87	60.14
Zm00001d047096_P001	Maize	extracellular	56.38	56.38
Zm00001d047147_P001	Maize	extracellular	52.13	54.65
Zm00001d047146_P001	Maize	extracellular	52.13	54.65
Zm00001d047142_P001	Maize	extracellular	52.13	54.65
Zm00001d047135_P011	Maize	extracellular	51.77	54.28
Zm00001d004586_P001	Maize	extracellular	59.93	53.99
Zm00001d027283_P001	Maize	extracellular	60.64	53.77
Zm00001d017741_P001	Maize	extracellular	29.43	52.2
Zm00001d017736_P001	Maize	cytosol	35.46	51.81
Zm00001d047094_P001	Maize	extracellular	51.06	51.61
Zm00001d017740_P001	Maize	extracellular	45.39	50.59
Zm00001d017735_P001	Maize	extracellular	45.04	50.2
Zm00001d017737_P001	Maize	extracellular	46.45	48.52
Zm00001d040608_P001	Maize	extracellular	46.1	48.51
Zm00001d048384_P001	Maize	extracellular	46.1	48.33
Zm00001d017733_P001	Maize	extracellular	46.1	48.15
Zm00001d017732_P001	Maize	extracellular	46.1	48.15
Zm00001d040609_P001	Maize	extracellular	45.74	47.96
Zm00001d017731_P001	Maize	extracellular	39.36	47.64
Zm00001d029827_P001	Maize	extracellular	37.23	45.65
Zm00001d026171_P001	Maize	extracellular	30.85	44.62
Zm00001d017493_P001	Maize	extracellular	41.49	43.82
Zm00001d045861_P001	Maize	mitochondrion	40.78	43.4
Zm00001d026170_P001	Maize	extracellular	40.07	43.13
Zm00001d045792_P001	Maize	extracellular	41.13	42.96
Zm00001d017494_P001	Maize	extracellular	44.33	42.23
Zm00001d017495_P001	Maize	extracellular	43.97	42.18
Zm00001d026169_P001	Maize	extracellular	43.26	41.78
Zm00001d051368_P001	Maize	extracellular	23.05	41.14
Zm00001d017377_P001	Maize	extracellular	36.17	38.06
Zm00001d019560_P001	Maize	plasma membrane	40.43	37.01
Zm00001d019557_P001	Maize	extracellular, plastid	32.27	31.49
Zm00001d002860_P002	Maize	extracellular	33.33	30.82
Zm00001d017734_P001	Maize	cytosol	46.1	28.38
Zm00001d006360_P001	Maize	extracellular	24.11	25.0
Zm00001d027520_P001	Maize	extracellular	24.47	24.82
Zm00001d048344_P002	Maize	extracellular	24.11	24.82
Zm00001d029783_P003	Maize	extracellular	23.05	23.64
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	19.86	17.55
Zm00001d033231_P003	Maize	extracellular	38.65	15.27

Protein Annotations

EntrezGene:103637654	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:B4FBN4	EMBL:BT034522
EMBL:BT038566	EMBL:BT040811	EMBL:BT063962	EMBL:BT085831	EMBL:EU960857	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
InterPro:LolPI	ProteinID:ONL99817.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF9	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI00017B63F6	EnsemblPlantsGene:Zm00001d029899
EnsemblPlants:Zm00001d029899_P001	EnsemblPlants:Zm00001d029899_T001	SEG:seg	:	:	:

Description

beta expansin2 beta expansin2

Coordinates

chr1:-:93193094..93195786

Molecular Weight (calculated)

31181.8 Da

IEP (calculated)

7.981

GRAVY (calculated)

-0.429

Length

282 amino acids

Sequence
(BLAST)

001: MGSPSSLPAA AALVLLALLA GAQCREAQFD AADAGAENFN TSEAAVYWGP WQKARATWYG QPNGAGPDDN GGACGFKHTN QYPFMSMGSC GNQPLFKDGK
101: GCGSCYKIRC RKDPSCSGRT ETVIITDMNY YPVSKYHFDL SGTAFGRLAK PGLNDKLRHS GIIDIEFTRV PCEFPGLKIG FHVEEYSSPV YFAVLVEYED
201: GDGDVVQVDL MESKTARGPP TGRWAPMRES WGSIWRMDTN HRMQPPFSIR IRNESGKTLV ARNVIPANWR PNTFYRSFVQ YS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.