Factsheet for Zm00001d026170_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11234	Sorghum	extracellular	93.13	92.78
TraesCS2D01G411000.1	Wheat	extracellular	79.77	79.77
TraesCS2A01G413600.1	Wheat	extracellular	79.01	79.01
Os05t0246300-01	Rice	extracellular	79.39	78.79
Os04t0552000-00	Rice	extracellular	78.63	78.03
TraesCS2B01G432300.1	Wheat	plastid	77.48	77.48
Zm00001d051368_P001	Maize	extracellular	45.42	75.32
HORVU2Hr1G097480.1	Barley	extracellular	80.92	74.91
Zm00001d017493_P001	Maize	extracellular	71.37	70.04
Zm00001d045861_P001	Maize	mitochondrion	66.41	65.66
Zm00001d045792_P001	Maize	extracellular	66.79	64.81
Zm00001d026171_P001	Maize	extracellular	46.18	62.05
GSMUA_AchrUn_...	Banana	extracellular	59.16	58.71
VIT_15s0021g02670.t01	Wine grape	extracellular	61.07	58.61
Solyc01g090810.2.1	Tomato	extracellular	61.45	58.55
VIT_15s0021g02700.t01	Wine grape	extracellular	59.92	57.51
PGSC0003DMT400048506	Potato	plastid	41.98	56.7
GSMUA_Achr4P26910_001	Banana	extracellular	58.78	56.62
KRH75302	Soybean	extracellular	58.78	55.6
KRH33426	Soybean	extracellular	57.63	55.51
CDY18948	Canola	extracellular	41.22	55.38
KRG88934	Soybean	extracellular, vacuole	58.4	55.23
Zm00001d026169_P001	Maize	extracellular	61.07	54.79
CDY18951	Canola	extracellular	56.87	54.18
AT1G65680.1	Thale cress	extracellular	55.73	53.48
KRH33423	Soybean	extracellular	56.11	53.07
Zm00001d017495_P001	Maize	extracellular	59.54	53.06
Zm00001d017494_P001	Maize	extracellular	59.16	52.36
CDY18950	Canola	cytosol, extracellular, plastid	47.33	52.32
CDY72345	Canola	cytosol	48.47	52.05
AT1G65681.1	Thale cress	cytosol	44.27	52.02
CDX74710	Canola	extracellular	54.2	51.82
CDY70406	Canola	extracellular	54.2	51.82
Bra004889.1-P	Field mustard	extracellular	54.2	51.64
AT2G45110.1	Thale cress	extracellular	50.38	50.97
CDY72655	Canola	cytosol, plastid	32.82	50.89
VIT_09s0002g08510.t01	Wine grape	extracellular	53.82	50.54
CDX74711	Canola	extracellular	50.0	50.19
Solyc10g018500.1.1	Tomato	extracellular	50.76	50.19
CDY72505	Canola	cytosol	30.53	50.0
Bra000370.1-P	Field mustard	extracellular	48.47	49.03
CDX83404	Canola	extracellular	48.47	49.03
CDY18946	Canola	extracellular	49.62	48.87
Solyc03g093390.2.1	Tomato	extracellular, nucleus	53.05	48.77
Bra035987.1-P	Field mustard	extracellular	48.85	48.3
CDX96901	Canola	extracellular	48.85	48.3
CDY14888	Canola	extracellular	48.85	48.3
Zm00001d029906_P001	Maize	extracellular	48.85	47.76
KRH65410	Soybean	extracellular	48.47	47.57
Zm00001d019560_P001	Maize	plasma membrane	54.96	46.75
Zm00001d047090_P002	Maize	extracellular	47.71	46.3
Zm00001d047093_P001	Maize	extracellular	46.56	46.21
Zm00001d029903_P002	Maize	extracellular	46.56	45.69
Zm00001d047089_P001	Maize	extracellular	46.18	45.32
Solyc01g090820.1.1	Tomato	extracellular	44.27	45.14
Zm00001d029913_P001	Maize	extracellular	46.95	44.57
Bra004890.1-P	Field mustard	extracellular	53.82	44.34
Zm00001d017736_P001	Maize	cytosol	32.44	44.04
Zm00001d047096_P001	Maize	extracellular	47.33	43.97
Solyc07g049540.1.1	Tomato	extracellular	43.13	43.97
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	21.76	43.85
CDX95627	Canola	extracellular	46.18	43.37
Zm00001d027281_P001	Maize	extracellular	45.04	43.22
Zm00001d029907_P001	Maize	extracellular	44.27	42.49
Zm00001d017735_P001	Maize	extracellular	40.84	42.29
Zm00001d017740_P001	Maize	extracellular	40.84	42.29
Solyc05g052330.1.1	Tomato	extracellular	43.13	42.16
AT3G60570.1	Thale cress	extracellular	42.37	42.05
Zm00001d047146_P001	Maize	extracellular	43.13	42.01
Zm00001d047147_P001	Maize	extracellular	43.13	42.01
Zm00001d040608_P001	Maize	extracellular	42.75	41.79
Zm00001d047135_P011	Maize	extracellular	42.75	41.64
Zm00001d048384_P001	Maize	extracellular	42.75	41.64
Zm00001d047091_P001	Maize	extracellular	43.13	41.39
Zm00001d047142_P001	Maize	extracellular	42.37	41.26
Zm00001d047094_P001	Maize	extracellular	43.89	41.22
CDX74713	Canola	extracellular	53.82	41.11
Zm00001d040609_P001	Maize	extracellular	41.98	40.89
Zm00001d029899_P001	Maize	extracellular, mitochondrion	43.13	40.07
PGSC0003DMT400095086	Potato	plastid	38.17	40.0
Zm00001d017737_P001	Maize	extracellular	41.22	40.0
Zm00001d017731_P001	Maize	extracellular	35.5	39.91
Zm00001d047087_P001	Maize	extracellular	43.51	39.86
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	20.99	39.86
CDY71186	Canola	extracellular	41.22	39.85
Bra003421.1-P	Field mustard	extracellular	40.46	39.85
CDX67835	Canola	extracellular	40.46	39.85
Zm00001d017732_P001	Maize	extracellular	40.84	39.63
Zm00001d017733_P001	Maize	extracellular	40.84	39.63
Zm00001d017377_P001	Maize	extracellular	40.46	39.55
Zm00001d019557_P001	Maize	extracellular, plastid	43.51	39.45
Zm00001d017741_P001	Maize	extracellular	23.66	38.99
Zm00001d027283_P001	Maize	extracellular	46.95	38.68
Zm00001d029827_P001	Maize	extracellular	33.21	37.83
Zm00001d004586_P001	Maize	extracellular	43.51	36.42
Zm00001d002860_P002	Maize	extracellular	38.93	33.44
CDY48362	Canola	extracellular	44.66	32.77
Bra014484.1-P	Field mustard	extracellular	44.66	32.5
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	54.96	31.37
Zm00001d048344_P002	Maize	extracellular	29.77	28.47
Zm00001d006360_P001	Maize	extracellular	29.01	27.94
Zm00001d027520_P001	Maize	extracellular	29.39	27.7
Zm00001d029783_P003	Maize	extracellular	29.01	27.64
Zm00001d017734_P001	Maize	cytosol	41.22	23.58
Zm00001d033231_P003	Maize	extracellular	63.74	23.39
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	23.66	19.44

Protein Annotations

EntrezGene:103641999	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	ProteinID:AQK45763.1	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
UniProt:K7TN25	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF52	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000220F75C	EnsemblPlantsGene:Zm00001d026170
EnsemblPlants:Zm00001d026170_P001	EnsemblPlants:Zm00001d026170_T001	SEG:seg	:	:	:

Description

Expansin-B4

Coordinates

chr10:-:140281944..140283238

Molecular Weight (calculated)

26893.7 Da

IEP (calculated)

6.220

GRAVY (calculated)

0.115

Length

262 amino acids

Sequence
(BLAST)

001: MACKPQLLFF TAIAALASII HPCASVEFHR KLSSWSDGGA TWYGAATGAG SDGGACGYRG AVDQAPFSSM IAAGSPSIYN SGKGCGSCFQ VKCTGNDACS
101: GDPVTVVITD ECPGGACLSE PSHFDMSGTA FGAMAKPGQA DKLRGAGVLQ IQYTRVQCNW PGVQLTFVVD AGSNPEYFAV LVKYVNGDGD LSAVDLMQTG
201: AGASWASMQP SWGAVWKFSA GSPLLAPLSI RLTSSSGKQL VASNVIPAGW TPGATYQSSV NY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.