Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72505 | Canola | cytosol | 60.0 | 99.38 |
| CDY14888 | Canola | extracellular | 98.49 | 98.49 |
| CDY72655 | Canola | cytosol, plastid | 61.13 | 95.86 |
| CDX83404 | Canola | extracellular | 76.98 | 78.76 |
| AT2G45110.1 | Thale cress | extracellular | 76.6 | 78.38 |
| AT1G65681.1 | Thale cress | cytosol | 62.64 | 74.44 |
| CDY72345 | Canola | cytosol | 67.92 | 73.77 |
| CDX74711 | Canola | extracellular | 71.7 | 72.8 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 64.91 | 72.57 |
| CDY18946 | Canola | extracellular | 70.94 | 70.68 |
| CDX95627 | Canola | extracellular | 72.08 | 68.46 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 49.81 | 55.7 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 53.21 | 55.51 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 53.21 | 55.29 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 52.83 | 55.12 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 51.32 | 54.62 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 50.94 | 54.22 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 51.32 | 54.18 |
| TraesCSU01G009600.1 | Wheat | extracellular | 51.7 | 54.15 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 50.57 | 53.82 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 51.32 | 53.54 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 51.32 | 53.54 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 50.94 | 53.15 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 50.94 | 53.15 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 50.19 | 52.99 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 47.17 | 52.3 |
| CDX67835 | Canola | extracellular | 52.45 | 52.26 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 36.98 | 51.31 |
| CDY71186 | Canola | extracellular | 52.45 | 51.29 |
| Zm00001d051368_P001 | Maize | extracellular | 30.57 | 51.27 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 48.3 | 50.79 |
| TraesCS2B01G432300.1 | Wheat | plastid | 50.19 | 50.76 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 50.19 | 50.76 |
| Os04t0552000-00 | Rice | extracellular | 50.57 | 50.76 |
| Zm00001d017493_P001 | Maize | extracellular | 50.57 | 50.19 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 49.43 | 50.0 |
| EES07509 | Sorghum | extracellular | 49.06 | 49.24 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 49.06 | 49.06 |
| EES11234 | Sorghum | extracellular | 48.68 | 49.05 |
| Os05t0246300-01 | Rice | extracellular | 48.68 | 48.86 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 48.3 | 48.85 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 48.3 | 48.85 |
| Zm00001d026170_P001 | Maize | extracellular | 48.3 | 48.85 |
| Zm00001d045861_P001 | Maize | mitochondrion | 48.68 | 48.68 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 48.68 | 48.68 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 47.92 | 48.66 |
| KXG19818 | Sorghum | extracellular | 47.55 | 48.65 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 48.68 | 48.5 |
| EER88254 | Sorghum | extracellular | 47.17 | 48.26 |
| Os02t0658600-00 | Rice | plastid | 49.43 | 47.99 |
| Zm00001d045792_P001 | Maize | extracellular | 48.68 | 47.78 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 47.92 | 47.74 |
| Solyc10g018500.1.1 | Tomato | extracellular | 47.17 | 47.17 |
| CDY18948 | Canola | extracellular | 34.34 | 46.67 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 49.81 | 46.64 |
| Solyc01g090820.1.1 | Tomato | extracellular | 42.64 | 43.97 |
| CDX74710 | Canola | extracellular | 44.91 | 43.43 |
| CDY70406 | Canola | extracellular | 44.91 | 43.43 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 47.55 | 43.15 |
| PGSC0003DMT400030395 | Potato | cytosol, extracellular, mitochondrion, nucleus | 21.13 | 43.08 |
| GSMUA_AchrUn_... | Banana | extracellular | 29.06 | 42.78 |
| CDY18951 | Canola | extracellular | 44.15 | 42.55 |
| Solyc05g052330.1.1 | Tomato | extracellular | 42.64 | 42.16 |
| Solyc07g049540.1.1 | Tomato | extracellular | 38.87 | 40.08 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 45.66 | 39.16 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 45.28 | 38.96 |
| CDY18990 | Canola | extracellular | 38.11 | 38.11 |
| CDY48362 | Canola | extracellular | 51.32 | 38.1 |
| PGSC0003DMT400095086 | Potato | plastid | 35.85 | 38.0 |
| EER93754 | Sorghum | extracellular | 43.77 | 37.91 |
| CDY70556 | Canola | extracellular | 37.74 | 37.74 |
| CDY58728 | Canola | extracellular | 37.74 | 37.74 |
| Os03t0645000-00 | Rice | mitochondrion | 44.15 | 37.38 |
| KXG37946 | Sorghum | extracellular | 45.66 | 37.23 |
| CDY05789 | Canola | extracellular | 36.6 | 36.6 |
| CDY31940 | Canola | extracellular | 36.23 | 36.23 |
| CDX74713 | Canola | extracellular | 42.64 | 32.94 |
| CDY65447 | Canola | extracellular | 27.55 | 29.2 |
| CDY09659 | Canola | plasma membrane | 27.55 | 29.2 |
| HORVU5Hr1G092910.9 | Barley | plastid | 45.28 | 28.99 |
| CDY42954 | Canola | extracellular | 26.42 | 28.0 |
| CDY35606 | Canola | extracellular | 26.04 | 27.6 |
| CDX90493 | Canola | cytosol, extracellular, nucleus | 13.21 | 26.72 |
| CDY52801 | Canola | extracellular | 26.79 | 26.39 |
| CDY69288 | Canola | extracellular | 26.04 | 26.14 |
| CDY61895 | Canola | extracellular | 26.42 | 26.02 |
| CDY64278 | Canola | extracellular | 25.66 | 25.66 |
| CDY72634 | Canola | extracellular | 25.66 | 25.66 |
| Zm00001d033231_P003 | Maize | extracellular | 43.02 | 15.97 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | GO:A0A078E6Q3 | EnsemblPlants:CDX96901 | ProteinID:CDX96901 |
| ProteinID:CDX96901.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | EnsemblPlantsGene:GSBRNA2T00103783001 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF3 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| UniParc:UPI0004EF2794 | SEG:seg | : | : | : | : |
Description
BnaC02g30390D
Coordinates
chrLK031896:-:180207..181406
Molecular Weight (calculated)
28281.5 Da
IEP (calculated)
6.493
GRAVY (calculated)
0.023
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSHRYFA ILALFAVSLK FSYSQNVTIE DNGWGYAGVT WYGEAGGAGS TGGACGYGFA VANPPFYGMV SAGGPSLFNN GKGCGTCYQV VCLENPACSM
101: RPIRVTITDE CPGGPCASEP AHFDLSGKAI GALARHGQAD QLRAAGVLRV VYRRVPCSYR ESSYRWSTIA LHIDAGANPY YIAFVVEYEN GDGDLASVEI
201: QPAGGSFIPM QEMRSAVWKL NSGSALIGPF NIRLTSGETD KVIVAQAVIP VNWRADETYR SIVNF
101: RPIRVTITDE CPGGPCASEP AHFDLSGKAI GALARHGQAD QLRAAGVLRV VYRRVPCSYR ESSYRWSTIA LHIDAGANPY YIAFVVEYEN GDGDLASVEI
201: QPAGGSFIPM QEMRSAVWKL NSGSALIGPF NIRLTSGETD KVIVAQAVIP VNWRADETYR SIVNF
001: MIGELDFPFL GAGSTGGACG FAVANPPLYG MVSAGGPSVF NNGIGCGTCF QILCNGHPAC SRRPITVTIT DECPGGPCAS EPAHFDLSGK AMGALARPGQ
101: GDRLRSAGVL RVYYRRVECL YRRTNIAFRM DPGANPYYIS FVVEYENGDG DLAYIEIQPA DGEFIPMQEM RSAVWKISSG SPLTGPFNIR LTSAESHKVV
201: LAYNVIPANW KPNETYRSVV NFK
101: GDRLRSAGVL RVYYRRVECL YRRTNIAFRM DPGANPYYIS FVVEYENGDG DLAYIEIQPA DGEFIPMQEM RSAVWKISSG SPLTGPFNIR LTSAESHKVV
201: LAYNVIPANW KPNETYRSVV NFK
Arabidopsis Description
EXPB6Expansin-B6 [Source:UniProtKB/Swiss-Prot;Acc:F4IBJ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.