CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72505	Canola	cytosol	90.53	95.62
Bra035987.1-P	Field mustard	extracellular	97.63	62.26
CDY14888	Canola	extracellular	97.63	62.26
CDX96901	Canola	extracellular	95.86	61.13
AT1G65681.1	Thale cress	cytosol	72.78	55.16
CDY18950	Canola	cytosol, extracellular, plastid	71.01	50.63
CDX83404	Canola	extracellular	76.92	50.19
CDY72345	Canola	cytosol	71.6	49.59
AT2G45110.1	Thale cress	extracellular	75.74	49.42
CDX74711	Canola	extracellular	71.6	46.36
CDY18946	Canola	extracellular	71.01	45.11
CDX95627	Canola	extracellular	70.41	42.65
TraesCS2B01G122100.1	Wheat	extracellular	46.75	41.36
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	31.36	40.77
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	55.62	39.66
TraesCS2B01G095600.1	Wheat	extracellular	57.4	38.04
TraesCS2D01G078900.1	Wheat	extracellular	56.21	37.4
HORVU2Hr1G013360.1	Barley	extracellular	55.03	37.05
TraesCSU01G009600.1	Wheat	extracellular	55.03	36.76
TraesCS2A01G081200.1	Wheat	extracellular	55.03	36.61
TraesCS2D01G592900.1	Wheat	extracellular	53.85	36.55
TraesCS2D01G104800.1	Wheat	extracellular	54.44	36.22
TraesCS2B01G607400.1	Wheat	extracellular	53.25	36.14
TraesCS2A01G580200.1	Wheat	extracellular	53.25	35.86
TraesCS2A01G080800.1	Wheat	extracellular	53.85	35.83
TraesCS2A01G105200.1	Wheat	extracellular	53.85	35.83
TraesCS2A01G580300.1	Wheat	extracellular	52.66	35.74
CDX67835	Canola	extracellular	56.21	35.71
TraesCS2D01G078800.1	Wheat	extracellular	53.25	35.43
Os04t0552000-00	Rice	extracellular	55.03	35.23
TraesCS2D01G078600.1	Wheat	extracellular	49.7	35.15
CDY71186	Canola	extracellular	55.62	34.69
TraesCS2B01G095700.1	Wheat	extracellular	50.89	34.13
Os05t0246300-01	Rice	extracellular	52.66	33.71
Zm00001d017493_P001	Maize	extracellular	53.25	33.71
Os02t0658600-00	Rice	plastid	54.44	33.7
TraesCS2B01G432300.1	Wheat	plastid	52.07	33.59
TraesCS2A01G413600.1	Wheat	extracellular	52.07	33.59
EES07509	Sorghum	extracellular	52.07	33.33
TraesCS2D01G411000.1	Wheat	extracellular	51.48	33.21
Zm00001d026170_P001	Maize	extracellular	50.89	32.82
HORVU0Hr1G016380.2	Barley	extracellular	50.89	32.45
EES11234	Sorghum	extracellular	50.3	32.32
Zm00001d045861_P001	Maize	mitochondrion	50.3	32.08
TraesCS6A01G249700.1	Wheat	extracellular	50.3	31.95
TraesCS6A01G249400.2	Wheat	extracellular	49.7	31.7
TraesCS6D01G231400.1	Wheat	extracellular	49.7	31.58
Zm00001d045792_P001	Maize	extracellular	50.3	31.48
KXG19818	Sorghum	extracellular	47.93	31.27
HORVU2Hr1G097480.1	Barley	extracellular	52.07	31.1
GSMUA_Achr2P13740_001	Banana	extracellular	47.93	30.92
GSMUA_Achr2P13730_001	Banana	extracellular	47.93	30.92
EER88254	Sorghum	extracellular	47.34	30.89
GSMUA_Achr2P13750_001	Banana	extracellular	47.34	30.65
Solyc10g018500.1.1	Tomato	extracellular	47.34	30.19
Solyc05g052330.1.1	Tomato	extracellular	47.34	29.85
HORVU2Hr1G013340.1	Barley	extracellular	50.3	29.11
CDX74710	Canola	extracellular	45.56	28.1
CDY70406	Canola	extracellular	45.56	28.1
Solyc01g090820.1.1	Tomato	extracellular	42.6	28.02
CDY18951	Canola	extracellular	45.56	28.0
CDY18948	Canola	extracellular	31.95	27.69
PGSC0003DMT400095086	Potato	plastid	40.83	27.6
Os03t0645000-00	Rice	mitochondrion	50.89	27.48
Solyc07g049540.1.1	Tomato	extracellular	41.42	27.24
TraesCS5B01G376500.1	Wheat	extracellular	49.7	27.18
TraesCS5D01G384200.1	Wheat	extracellular	49.11	26.95
CDY48362	Canola	extracellular	53.85	25.49
CDX90493	Canola	cytosol, extracellular, nucleus	19.53	25.19
EER93754	Sorghum	extracellular	45.56	25.16
Zm00001d051368_P001	Maize	extracellular	23.08	24.68
KXG37946	Sorghum	extracellular	47.34	24.62
CDY18990	Canola	extracellular	38.46	24.53
CDY58728	Canola	extracellular	37.28	23.77
CDY70556	Canola	extracellular	37.28	23.77
CDY05789	Canola	extracellular	36.09	23.02
CDY31940	Canola	extracellular	35.5	22.64
GSMUA_AchrUn_...	Banana	extracellular	23.67	22.22
CDX74713	Canola	extracellular	42.6	20.99
HORVU5Hr1G092910.9	Barley	plastid	49.7	20.29
CDY65447	Canola	extracellular	27.22	18.4
CDY09659	Canola	plasma membrane	27.22	18.4
CDY42954	Canola	extracellular	26.04	17.6
CDY35606	Canola	extracellular	25.44	17.2
CDY52801	Canola	extracellular	26.63	16.73
CDY61895	Canola	extracellular	26.04	16.36
CDY69288	Canola	extracellular	24.85	15.91
CDY64278	Canola	extracellular	24.85	15.85
CDY72634	Canola	extracellular	24.85	15.85
Zm00001d033231_P003	Maize	extracellular	46.15	10.92

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	GO:A0A078K1L3	UniProt:A0A078K1L3	EnsemblPlants:CDY72655
ProteinID:CDY72655	ProteinID:CDY72655.1	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:GSBRNA2T00034209001	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	UniParc:UPI0004EE5B40	:	:

Description

BnaAnng41880DBnaAnng41880D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K1L3]

Coordinates

chrLK052466:-:1176..1884

Molecular Weight (calculated)

18266.8 Da

IEP (calculated)

5.650

GRAVY (calculated)

0.052

Length

169 amino acids

Sequence
(BLAST)

001: VVCLENPACS MRPIRVTITD ECPGGPCASE PAHFDLSGKA IGALARHGQA DQLRAAGVLR VVYRRYVQTW STIALHIDAG ANPYYIAFVV EYENGDGDLA
101: SVEIQPAGGS FIPMQEMRSA VWKLNSGSAL IGPFNIRLTS GETGNVIVAQ TVIPVNWRAD ETYRSIVNF

Best Arabidopsis Sequence Match ( AT1G65681.1 )
(BLAST)

001: MIGELDFPFL GAGSTGGACG FAVANPPLYG MVSAGGPSVF NNGIGCGTCF QILCNGHPAC SRRPITVTIT DECPGGPCAS EPAHFDLSGK AMGALARPGQ
101: GDRLRSAGVL RVYYRRVECL YRRTNIAFRM DPGANPYYIS FVVEYENGDG DLAYIEIQPA DGEFIPMQEM RSAVWKISSG SPLTGPFNIR LTSAESHKVV
201: LAYNVIPANW KPNETYRSVV NFK

Arabidopsis Description

EXPB6Expansin-B6 [Source:UniProtKB/Swiss-Prot;Acc:F4IBJ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.