Factsheet for TraesCS2B01G432300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G413600.1	Wheat	extracellular	95.04	95.04
TraesCS2D01G411000.1	Wheat	extracellular	95.04	95.04
HORVU2Hr1G097480.1	Barley	extracellular	94.66	87.63
Os04t0552000-00	Rice	extracellular	79.01	78.41
EES11234	Sorghum	extracellular	78.24	77.95
Zm00001d026170_P001	Maize	extracellular	77.48	77.48
Os05t0246300-01	Rice	extracellular	77.86	77.27
TraesCS2B01G095600.1	Wheat	extracellular	62.6	64.31
TraesCS2B01G607400.1	Wheat	extracellular	60.69	63.86
TraesCS2B01G095700.1	Wheat	extracellular	58.02	60.32
TraesCS2B01G122100.1	Wheat	extracellular	43.51	59.69
Solyc01g090810.2.1	Tomato	extracellular	62.21	59.27
GSMUA_AchrUn_...	Banana	extracellular	59.16	58.71
TraesCS5B01G376500.1	Wheat	extracellular	68.32	57.93
VIT_15s0021g02670.t01	Wine grape	extracellular	60.31	57.88
CDY18948	Canola	extracellular	42.75	57.44
VIT_15s0021g02700.t01	Wine grape	extracellular	59.54	57.14
PGSC0003DMT400048506	Potato	plastid	41.6	56.19
TraesCS2B01G432200.1	Wheat	extracellular, plastid	59.92	55.87
GSMUA_Achr4P26910_001	Banana	extracellular	57.63	55.51
CDY18951	Canola	extracellular	58.02	55.27
TraesCS2B01G432100.1	Wheat	extracellular	54.2	54.41
AT1G65680.1	Thale cress	extracellular	56.11	53.85
CDY18950	Canola	cytosol, extracellular, plastid	48.47	53.59
KRH33423	Soybean	extracellular	56.11	53.07
KRH33426	Soybean	extracellular	54.96	52.94
CDY70406	Canola	extracellular	54.96	52.55
CDX74710	Canola	extracellular	54.58	52.19
CDY72655	Canola	cytosol, plastid	33.59	52.07
CDY72345	Canola	cytosol	48.47	52.05
Bra004889.1-P	Field mustard	extracellular	54.58	52.0
KRH75302	Soybean	extracellular	54.58	51.62
KRG88934	Soybean	extracellular, vacuole	54.58	51.62
VIT_09s0002g08510.t01	Wine grape	extracellular	54.58	51.25
CDY72505	Canola	cytosol	31.3	51.25
Bra000370.1-P	Field mustard	extracellular	50.38	50.97
CDX83404	Canola	extracellular	50.38	50.97
AT2G45110.1	Thale cress	extracellular	50.38	50.97
TraesCS6B01G275800.1	Wheat	extracellular	55.73	50.87
TraesCS6B01G275700.1	Wheat	extracellular	55.73	50.52
CDX74711	Canola	extracellular	50.0	50.19
CDY14888	Canola	extracellular	50.76	50.19
CDX96901	Canola	extracellular	50.76	50.19
Bra035987.1-P	Field mustard	extracellular	50.76	50.19
TraesCS3B01G535800.1	Wheat	extracellular	54.96	49.83
AT1G65681.1	Thale cress	cytosol	42.37	49.78
KRH65410	Soybean	extracellular	50.38	49.44
Solyc10g018500.1.1	Tomato	extracellular	49.62	49.06
TraesCS6B01G046000.1	Wheat	extracellular	50.76	48.72
CDY18946	Canola	extracellular	49.24	48.5
TraesCS6B01G046400.1	Wheat	extracellular	50.38	48.35
TraesCS6B01G046300.1	Wheat	extracellular	50.38	48.35
TraesCS6B01G046200.1	Wheat	extracellular	50.38	48.35
TraesCS6B01G046100.1	Wheat	extracellular	50.0	47.99
Solyc03g093390.2.1	Tomato	extracellular, nucleus	51.91	47.72
TraesCS3B01G014400.1	Wheat	cytosol	44.66	47.18
TraesCS1B01G225800.1	Wheat	extracellular	48.47	46.86
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	48.85	46.72
Solyc01g090820.1.1	Tomato	extracellular	45.42	46.3
TraesCS1B01G226000.2	Wheat	extracellular	47.71	46.3
Bra004890.1-P	Field mustard	extracellular	55.34	45.6
CDX95627	Canola	extracellular	48.47	45.52
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	22.14	44.62
TraesCS1B01G222300.1	Wheat	extracellular	45.04	44.53
Solyc05g052330.1.1	Tomato	extracellular	44.66	43.66
TraesCS4B01G375200.1	Wheat	extracellular	48.47	43.49
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	49.24	43.29
TraesCS6B01G245700.1	Wheat	extracellular	48.47	42.91
CDX74713	Canola	extracellular	55.34	42.27
AT3G60570.1	Thale cress	extracellular	42.37	42.05
TraesCS3B01G526800.1	Wheat	extracellular	48.09	42.0
TraesCS3B01G524500.1	Wheat	extracellular	49.62	41.8
Solyc07g049540.1.1	Tomato	extracellular	40.84	41.63
TraesCS2B01G480700.1	Wheat	extracellular	41.98	41.51
TraesCS1B01G225700.1	Wheat	extracellular	47.33	41.06
Bra003421.1-P	Field mustard	extracellular	41.6	40.98
CDX67835	Canola	extracellular	41.6	40.98
CDY71186	Canola	extracellular	42.37	40.96
TraesCS4B01G362100.1	Wheat	extracellular	41.98	40.74
TraesCS4B01G362500.1	Wheat	extracellular	41.6	40.37
TraesCS4B01G362600.1	Wheat	extracellular, unclear	41.6	40.37
TraesCS6B01G264400.1	Wheat	extracellular	40.46	39.55
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	20.61	39.13
PGSC0003DMT400095086	Potato	plastid	37.02	38.8
TraesCS1B01G226100.1	Wheat	extracellular	45.8	38.46
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	50.0	38.42
TraesCS4B01G375600.1	Wheat	extracellular	48.09	36.95
TraesCS2B01G390000.1	Wheat	extracellular	38.17	35.59
Bra014484.1-P	Field mustard	extracellular	45.04	32.78
CDY48362	Canola	extracellular	44.66	32.77
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	54.96	31.37
TraesCS4B01G327100.1	Wheat	golgi	30.53	29.52
TraesCS4B01G327200.1	Wheat	extracellular	29.77	29.1
TraesCS1B01G217200.1	Wheat	extracellular	29.77	28.36
TraesCS4B01G326900.1	Wheat	extracellular	29.01	27.64
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	24.05	19.94
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	23.66	19.44
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	24.43	9.94

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF14	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2B01G432300	EnsemblPlants:TraesCS2B01G432300.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:621312723..621314027

Molecular Weight (calculated)

26983.0 Da

IEP (calculated)

7.928

GRAVY (calculated)

0.121

Length

262 amino acids

Sequence
(BLAST)

001: MASKLQLPRS FIAIVVLATV IHPCTSVEFH RKLASWSNAG ATWYGAANGA GSDGGACGYK GAVDQPPFSS MIAAGGPSLY ASGLGCGSCY QVKCTGNAAC
101: SSSPVTVVIT DQCPGGPCLE EPHFDLSGTA FGAMAKPGQA DQLRAAGVLQ IQFTRVQCNW DGVKLTFVVD AGSNPNYLAV LVQYQNGDGN LSGVELMQSG
201: AAAAWTPMQH SWGAVWKLDA GSALQAPLSL RLTSSSGKKL VASNVIPLGW KAGSAYQSAV NY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.