Factsheet for GSMUA_Achr4P26910_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G607400.1	Wheat	extracellular	57.72	63.05
TraesCS2D01G592900.1	Wheat	extracellular	57.35	62.65
GSMUA_Achr2P11930_001	Banana	extracellular	37.13	61.96
TraesCS2A01G580300.1	Wheat	extracellular	56.62	61.85
TraesCS2A01G580200.1	Wheat	extracellular	56.99	61.75
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	53.31	61.18
GSMUA_AchrUn_...	Banana	extracellular	58.82	60.61
Os04t0552000-00	Rice	extracellular	58.46	60.23
TraesCS2B01G095600.1	Wheat	extracellular	55.88	59.61
EES11234	Sorghum	extracellular	57.35	59.32
TraesCSU01G009600.1	Wheat	extracellular	55.15	59.29
TraesCS2A01G413600.1	Wheat	extracellular	56.99	59.16
HORVU2Hr1G013360.1	Barley	extracellular	54.41	58.96
TraesCS2D01G411000.1	Wheat	extracellular	56.62	58.78
Zm00001d026170_P001	Maize	extracellular	56.62	58.78
TraesCS2D01G078800.1	Wheat	extracellular	54.78	58.66
Zm00001d017493_P001	Maize	extracellular	56.99	58.05
Os05t0246300-01	Rice	extracellular	56.25	57.95
TraesCS2D01G078900.1	Wheat	extracellular	54.04	57.87
TraesCS2A01G081200.1	Wheat	extracellular	54.04	57.87
TraesCS2D01G104800.1	Wheat	extracellular	54.04	57.87
TraesCS2A01G105200.1	Wheat	extracellular	54.04	57.87
TraesCS2B01G432300.1	Wheat	plastid	55.51	57.63
TraesCS2B01G095700.1	Wheat	extracellular	53.31	57.54
TraesCS2A01G080800.1	Wheat	extracellular	53.31	57.09
TraesCS2B01G122100.1	Wheat	extracellular	40.07	57.07
GSMUA_Achr7P07040_001	Banana	extracellular	58.82	56.94
TraesCS6A01G249700.1	Wheat	extracellular	55.51	56.77
TraesCS6A01G249400.2	Wheat	extracellular	55.15	56.6
GSMUA_AchrUn_...	Banana	extracellular	19.12	56.52
Os02t0658600-00	Rice	plastid	56.62	56.41
KXG19818	Sorghum	extracellular	53.68	56.37
EER88254	Sorghum	extracellular	53.68	56.37
Zm00001d051368_P001	Maize	extracellular	32.72	56.33
Zm00001d045861_P001	Maize	mitochondrion	54.78	56.23
HORVU0Hr1G016380.2	Barley	extracellular	54.78	56.23
GSMUA_Achr2P13730_001	Banana	extracellular	54.04	56.11
EES07509	Sorghum	extracellular	54.41	56.06
TraesCS6D01G231400.1	Wheat	extracellular	54.41	55.64
GSMUA_Achr2P13740_001	Banana	extracellular	53.31	55.34
Zm00001d045792_P001	Maize	extracellular	54.78	55.19
GSMUA_Achr2P13750_001	Banana	extracellular	52.94	55.17
HORVU2Hr1G097480.1	Barley	extracellular	55.88	53.71
TraesCS2D01G078600.1	Wheat	extracellular	46.69	53.14
GSMUA_AchrUn_...	Banana	extracellular	34.19	51.67
HORVU2Hr1G013340.1	Barley	extracellular	52.94	49.32
TraesCS5D01G384200.1	Wheat	extracellular	51.1	45.13
TraesCS5B01G376500.1	Wheat	extracellular	51.1	44.98
EER93754	Sorghum	extracellular	50.37	44.77
KXG37946	Sorghum	extracellular	51.84	43.38
GSMUA_Achr5P12080_001	Banana	extracellular	41.91	42.7
GSMUA_AchrUn_...	Banana	extracellular	41.18	42.59
Os03t0645000-00	Rice	mitochondrion	48.53	42.17
GSMUA_Achr1P00120_001	Banana	extracellular	40.81	41.73
GSMUA_Achr11P...	Banana	extracellular	31.62	33.86
HORVU5Hr1G092910.9	Barley	plastid	51.1	33.57
GSMUA_AchrUn_...	Banana	extracellular	30.51	32.68
GSMUA_Achr5P11590_001	Banana	extracellular	27.94	29.12
GSMUA_Achr11P...	Banana	extracellular	27.57	28.2
GSMUA_Achr11P...	Banana	extracellular	26.47	27.17
GSMUA_AchrUn_...	Banana	extracellular	18.75	27.13
GSMUA_Achr5P19030_001	Banana	extracellular	26.1	26.89
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	26.47	23.45
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	26.47	22.57
Zm00001d033231_P003	Maize	extracellular	49.63	18.91

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:GSMUA_Achr4G26910_001	EnsemblPlants:GSMUA_Achr4P26910_001	EnsemblPlants:GSMUA_Achr4T26910_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M0SSF3	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002954DD2
SEG:seg	:	:	:	:	:

Description

Expansin-B15 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26910_001]

Coordinates

chr4:+:25963196..25964241

Molecular Weight (calculated)

28604.6 Da

IEP (calculated)

4.797

GRAVY (calculated)

-0.046

Length

272 amino acids

Sequence
(BLAST)

001: MAPPLHQSPS LVMASLTFLA LLNACFCSNP KHPKLSTSTS NWLPAGATWY GSANGAGSDG GACGYGGALE KPPFSSMISA GGPSLFKSGK GCGACYQVKC
101: TENAACSGDP VTVVITDECP GGPCLEKSAH FDMSGTAFGA MASSGRADEI RNAGVMTVQY ARVQCSYPGF DLAFRVDAGS NPYYFAVVIE YEEGDGDLAA
201: VELMQASSSA DSSQWLSMQQ SWGAVWKLNS AWQLQAPFSI RLTTLLSNRT IVADDVIPST WLPGETYRST TH

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.