Factsheet for GSMUA_AchrUn_randomP04750_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular	70.87	70.87
VIT_02s0012g00830.t01	Wine grape	extracellular	70.08	69.8
KRH77254	Soybean	extracellular	67.32	67.06
PGSC0003DMT400004660	Potato	extracellular	66.93	66.67
KRH28238	Soybean	extracellular	66.93	66.67
Os07t0496250-01	Rice	extracellular	66.93	66.41
PGSC0003DMT400052810	Potato	extracellular	65.75	66.01
KRH57566	Soybean	extracellular	64.57	65.6
Solyc08g077330.2.1	Tomato	extracellular	65.75	65.49
KRH04284	Soybean	extracellular	64.57	65.34
KRH76358	Soybean	extracellular, plasma membrane, vacuole	55.51	64.68
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	73.62	58.62
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	46.46	52.44
GSMUA_AchrUn_...	Banana	extracellular	27.17	36.7
GSMUA_Achr11P...	Banana	extracellular	36.61	34.96
GSMUA_Achr5P11590_001	Banana	extracellular	34.65	33.72
GSMUA_Achr5P19030_001	Banana	extracellular	34.65	33.33
GSMUA_Achr11P...	Banana	extracellular	34.25	32.83
GSMUA_Achr2P13740_001	Banana	extracellular	33.46	32.44
GSMUA_AchrUn_...	Banana	extracellular	33.07	31.82
GSMUA_Achr2P13730_001	Banana	extracellular	32.68	31.68
GSMUA_Achr2P13750_001	Banana	extracellular	31.89	31.03
GSMUA_Achr4P26910_001	Banana	extracellular	32.68	30.51
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	36.22	29.97
GSMUA_Achr2P11930_001	Banana	extracellular	18.9	29.45
GSMUA_AchrUn_...	Banana	extracellular	20.47	28.89
GSMUA_AchrUn_...	Banana	extracellular	10.24	28.26
GSMUA_Achr7P07040_001	Banana	extracellular	31.1	28.11
GSMUA_Achr5P12080_001	Banana	extracellular	28.74	27.34
GSMUA_AchrUn_...	Banana	extracellular	27.56	26.62
GSMUA_Achr1P00120_001	Banana	extracellular	27.56	26.32

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
EnsemblPlantsGene:GSMUA_AchrUn_randomG04750_001	EnsemblPlants:GSMUA_AchrUn_randomP04750_001	EnsemblPlants:GSMUA_AchrUn_randomT04750_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	UniProt:M0U6D7	PFAM:PF01357	PFAM:PF03330	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31692	PANTHER:PTHR31692:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI000294EACA	SEG:seg	:	:	:

Description

Expansin-like B1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04750_001]

Coordinates

chrchrUn_random:-:18754276..18755390

Molecular Weight (calculated)

27177.9 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.107

Length

254 amino acids

Sequence
(BLAST)

001: MALSAHKLLL LLLPLLLCQS KAKGDTCSGC FTHSSAAYYP NSDKEGTETG ACEYGTFGAT LNGGDVSAAS NLYRNGVGCG ACYQVRCTDA KYCSTDGVTI
101: VITDLGASGN TDFILSQHAF ARMGQNADAG ASLLSLGAVG IEYRRVSCSY PNKNITFKID QSSNLYYFAF QIWYQQGNKD ITAVQLCETE NFTCKLLERS
201: HGAVWAVASP PRGPLSVRML LSGGDDGDDT WVVPPNNIPQ NWTAGDIYDS GIQV

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.