Factsheet for GSMUA_Achr2P13730_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13740_001	Banana	extracellular	92.37	92.37
GSMUA_Achr2P13750_001	Banana	extracellular	89.31	89.66
GSMUA_AchrUn_...	Banana	extracellular	70.23	69.7
GSMUA_AchrUn_...	Banana	extracellular	41.6	60.56
GSMUA_Achr2P11930_001	Banana	extracellular	37.4	60.12
VIT_15s0021g02670.t01	Wine grape	extracellular	61.45	58.97
VIT_15s0021g02700.t01	Wine grape	extracellular	60.31	57.88
GSMUA_AchrUn_...	Banana	extracellular	19.08	54.35
CDY72345	Canola	cytosol	50.38	54.1
GSMUA_Achr4P26910_001	Banana	extracellular	56.11	54.04
CDY18948	Canola	extracellular	40.08	53.85
Solyc01g090810.2.1	Tomato	extracellular	56.49	53.82
PGSC0003DMT400048506	Potato	plastid	39.69	53.61
CDY18951	Canola	extracellular	56.11	53.45
GSMUA_Achr7P07040_001	Banana	extracellular	57.25	53.38
AT1G65680.1	Thale cress	extracellular	55.34	53.11
CDY18950	Canola	cytosol, extracellular, plastid	47.71	52.74
KRH33426	Soybean	extracellular	54.58	52.57
Solyc01g090820.1.1	Tomato	extracellular	51.15	52.14
CDX74711	Canola	extracellular	51.53	51.72
CDX74710	Canola	extracellular	53.82	51.46
CDY70406	Canola	extracellular	53.82	51.46
Bra004889.1-P	Field mustard	extracellular	53.82	51.27
KRG88934	Soybean	extracellular, vacuole	54.2	51.26
KRH75302	Soybean	extracellular	54.2	51.26
AT2G45110.1	Thale cress	extracellular	50.38	50.97
VIT_09s0002g08510.t01	Wine grape	extracellular	54.2	50.9
KRH33423	Soybean	extracellular	53.44	50.54
KRH65410	Soybean	extracellular	51.15	50.19
CDX83404	Canola	extracellular	48.85	49.42
Bra000370.1-P	Field mustard	extracellular	48.85	49.42
AT1G65681.1	Thale cress	cytosol	41.98	49.33
CDY18946	Canola	extracellular	50.0	49.25
Solyc10g018500.1.1	Tomato	extracellular	49.62	49.06
CDX96901	Canola	extracellular	48.85	48.3
CDY72505	Canola	cytosol	29.39	48.12
CDY72655	Canola	cytosol, plastid	30.92	47.93
Bra035987.1-P	Field mustard	extracellular	48.47	47.92
CDY14888	Canola	extracellular	48.47	47.92
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	23.66	47.69
Solyc05g052330.1.1	Tomato	extracellular	48.47	47.39
Solyc03g093390.2.1	Tomato	extracellular, nucleus	51.53	47.37
AT3G60570.1	Thale cress	extracellular	46.56	46.21
Solyc07g049540.1.1	Tomato	extracellular	44.27	45.14
Bra003421.1-P	Field mustard	extracellular	44.27	43.61
CDX67835	Canola	extracellular	44.27	43.61
PGSC0003DMT400095086	Potato	plastid	41.6	43.6
CDY71186	Canola	extracellular	45.04	43.54
Bra004890.1-P	Field mustard	extracellular	52.29	43.08
GSMUA_AchrUn_...	Banana	extracellular	43.13	42.97
CDX95627	Canola	extracellular	45.42	42.65
GSMUA_Achr1P00120_001	Banana	extracellular	41.98	41.35
GSMUA_Achr5P12080_001	Banana	extracellular	41.98	41.2
CDX74713	Canola	extracellular	52.67	40.23
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	20.99	39.86
CDY48362	Canola	extracellular	46.18	33.89
Bra014484.1-P	Field mustard	extracellular	46.18	33.61
GSMUA_Achr11P...	Banana	extracellular	32.44	33.46
GSMUA_AchrUn_...	Banana	extracellular	31.68	32.68
GSMUA_Achr11P...	Banana	extracellular	31.68	31.2
GSMUA_Achr5P11590_001	Banana	extracellular	30.15	30.27
GSMUA_Achr5P19030_001	Banana	extracellular	29.01	28.79
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	49.62	28.32
GSMUA_AchrUn_...	Banana	extracellular	19.85	27.66
GSMUA_Achr11P...	Banana	extracellular	27.48	27.17
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	30.15	25.73
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	27.1	22.26

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:GSMUA_Achr2G13730_001	EnsemblPlants:GSMUA_Achr2P13730_001	EnsemblPlants:GSMUA_Achr2T13730_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M0S7R4	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000296D54D
SEG:seg	:	:	:	:	:

Description

Expansin-B15 [Source:GMGC_GENE;Acc:GSMUA_Achr2G13730_001]

Coordinates

chr2:-:15739682..15740729

Molecular Weight (calculated)

26898.7 Da

IEP (calculated)

7.566

GRAVY (calculated)

0.095

Length

262 amino acids

Sequence
(BLAST)

001: MASSFRRLSS LLVFVGFLSL LRPCACYNRM NSSDTDLAMS PAVATWYGAA EGPGSTGGAC GYGDGVAKAP FDSKISAGGT SLYKSGKGCG ACYQVACTAN
101: PACSGSPVTV VITDQCPGGP CASDSVHFDL SGAAFGAMAK PGQADALRSV GSIQIQYARV PCSYPGFHVA FRVDDGSNSN YLAVLPEFVN GDGEISAVEV
201: GQGSSWTPMQ NSWGALWKLN APVPGPASIR LTSAVSSKTI VATNVIPAGW RPGATYYSNV NF

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.