Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000370.1-P Field mustard extracellular 83.87 90.35
CDX83404 Canola extracellular 83.87 90.35
CDY72345 Canola cytosol 67.03 76.64
AT2G45110.1 Thale cress extracellular 70.25 75.68
CDX74711 Canola extracellular 70.61 75.48
CDY18950 Canola cytosol, extracellular, plastid 63.8 75.11
CDY18946 Canola extracellular 70.25 73.68
CDY72505 Canola cytosol 41.58 72.5
CDX96901 Canola extracellular 68.46 72.08
CDY14888 Canola extracellular 67.74 71.32
CDY72655 Canola cytosol, plastid 42.65 70.41
AT1G65681.1 Thale cress cytosol 54.84 68.61
TraesCSU01G009600.1 Wheat extracellular 46.59 51.38
Zm00001d051368_P001 Maize extracellular 28.67 50.63
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 43.01 50.63
TraesCS2B01G607400.1 Wheat extracellular 45.16 50.6
TraesCS2D01G592900.1 Wheat extracellular 45.16 50.6
TraesCS2D01G078800.1 Wheat extracellular 45.52 50.0
HORVU2Hr1G013360.1 Barley extracellular 44.8 49.8
TraesCS2A01G580300.1 Wheat extracellular 44.44 49.8
TraesCS2B01G095700.1 Wheat extracellular 44.8 49.6
TraesCS2B01G095600.1 Wheat extracellular 45.16 49.41
TraesCS2A01G580200.1 Wheat extracellular 44.09 49.0
TraesCS2A01G081200.1 Wheat extracellular 44.44 48.82
TraesCS2D01G078900.1 Wheat extracellular 44.44 48.82
TraesCS2A01G413600.1 Wheat extracellular 45.52 48.47
TraesCS2B01G432300.1 Wheat plastid 45.52 48.47
Os04t0552000-00 Rice extracellular 45.52 48.11
TraesCS2A01G105200.1 Wheat extracellular 43.73 48.03
TraesCS2D01G104800.1 Wheat extracellular 43.73 48.03
HORVU0Hr1G016380.2 Barley extracellular 45.52 47.92
EES07509 Sorghum extracellular 45.16 47.73
TraesCS2D01G411000.1 Wheat extracellular 44.8 47.71
CDX67835 Canola extracellular 45.16 47.37
TraesCS2A01G080800.1 Wheat extracellular 43.01 47.24
CDY71186 Canola extracellular 45.88 47.23
Zm00001d017493_P001 Maize extracellular 45.16 47.19
CDY18948 Canola extracellular 32.62 46.67
EES11234 Sorghum extracellular 43.73 46.39
Zm00001d026170_P001 Maize extracellular 43.37 46.18
GSMUA_Achr2P13750_001 Banana extracellular 43.01 45.98
EER88254 Sorghum extracellular 42.65 45.95
KXG19818 Sorghum extracellular 42.65 45.95
TraesCS6A01G249700.1 Wheat extracellular 43.73 45.86
Os05t0246300-01 Rice extracellular 43.37 45.83
TraesCS6A01G249400.2 Wheat extracellular 43.37 45.66
Zm00001d045861_P001 Maize mitochondrion 43.37 45.66
TraesCS2D01G078600.1 Wheat extracellular 39.07 45.61
TraesCS2B01G122100.1 Wheat extracellular 31.18 45.55
GSMUA_Achr2P13730_001 Banana extracellular 42.65 45.42
GSMUA_Achr2P13740_001 Banana extracellular 42.65 45.42
TraesCS6D01G231400.1 Wheat extracellular 43.01 45.11
Solyc10g018500.1.1 Tomato extracellular 42.65 44.91
Zm00001d045792_P001 Maize extracellular 43.37 44.81
HORVU2Hr1G097480.1 Barley extracellular 45.16 44.52
Solyc01g090820.1.1 Tomato extracellular 40.14 43.58
Os02t0658600-00 Rice plastid 42.29 43.22
CDY18951 Canola extracellular 41.94 42.55
GSMUA_AchrUn_... Banana extracellular 27.24 42.22
CDY70406 Canola extracellular 41.22 41.97
HORVU2Hr1G013340.1 Barley extracellular 43.73 41.78
CDX74710 Canola extracellular 40.86 41.61
Solyc07g049540.1.1 Tomato extracellular 35.84 38.91
Solyc05g052330.1.1 Tomato extracellular 37.28 38.81
PGSC0003DMT400095086 Potato plastid 34.05 38.0
TraesCS5B01G376500.1 Wheat extracellular 41.94 37.86
CDY18990 Canola extracellular 35.84 37.74
TraesCS5D01G384200.1 Wheat extracellular 41.58 37.66
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 17.2 36.92
CDY05789 Canola extracellular 34.77 36.6
CDY31940 Canola extracellular 34.41 36.23
KXG37946 Sorghum extracellular 41.94 36.0
CDY70556 Canola extracellular 34.05 35.85
Os03t0645000-00 Rice mitochondrion 40.14 35.78
EER93754 Sorghum extracellular 39.07 35.62
CDY58728 Canola extracellular 33.69 35.47
CDY48362 Canola extracellular 43.37 33.89
CDX74713 Canola extracellular 41.58 33.82
HORVU5Hr1G092910.9 Barley plastid 41.58 28.02
CDY42954 Canola extracellular 24.01 26.8
CDY65447 Canola extracellular 23.66 26.4
CDY09659 Canola plasma membrane 23.66 26.4
CDY35606 Canola extracellular 23.66 26.4
CDY69288 Canola extracellular 21.86 23.11
CDX90493 Canola cytosol, extracellular, nucleus 10.75 22.9
CDY52801 Canola extracellular 21.51 22.3
CDY64278 Canola extracellular 21.15 22.26
CDY72634 Canola extracellular 21.15 22.26
CDY61895 Canola extracellular 21.15 21.93
Zm00001d033231_P003 Maize extracellular 38.71 15.13
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1GO:A0A078E3C2EnsemblPlants:CDX95627ProteinID:CDX95627
ProteinID:CDX95627.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003
GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953EnsemblPlantsGene:GSBRNA2T00101506001InterPro:IPR007112
InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF3
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTM
UniParc:UPI0004EE771BSEG:seg::::
Description
BnaC03g25080D
Coordinates
chrLK031890:+:333506..335435
Molecular Weight (calculated)
29634.9 Da
IEP (calculated)
8.856
GRAVY (calculated)
0.150
Length
279 amino acids
Sequence
(BLAST)
001: MHQIHYRLVY IALLALFAVS LKCCYCQNET LAAGWGNAGV TWYGEPEGAG STGGACGYGM AVANPPLYAM VSAGGPSLFN NGQGCGTCYQ IVCTGNAACS
101: GRPITVTITD ECPGGPCASE PFLFDLSGKA IGALAKPGQA GSLRAAGVLR VSYRRAPCLY RGTNIAFHVD AGANPFYMAF VVEYENGDGD LASVEIQPAG
201: GGFIAMQDMR SALWKVNSGS ALRGPFNIRL TSRESRKVVV AQGPIRLTGQ SLTFRVSLLV KLYFTRPPLL HKILWRKSF
Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.