Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90493 | Canola | cytosol, extracellular, nucleus | 51.2 | 97.71 |
| Bra012687.1-P | Field mustard | extracellular | 96.8 | 96.8 |
| CDY65447 | Canola | extracellular | 96.4 | 96.4 |
| CDY35606 | Canola | extracellular | 88.4 | 88.4 |
| CDY42954 | Canola | extracellular | 88.0 | 88.0 |
| AT4G17030.1 | Thale cress | extracellular | 86.8 | 86.8 |
| KRH77296 | Soybean | extracellular | 60.4 | 60.16 |
| KRH04222 | Soybean | extracellular | 60.4 | 60.16 |
| KRH28194 | Soybean | extracellular | 59.2 | 58.96 |
| KRH57515 | Soybean | extracellular | 58.8 | 58.57 |
| VIT_00s1455g00010.t01 | Wine grape | extracellular | 54.8 | 54.58 |
| VIT_00s0309g00050.t01 | Wine grape | extracellular | 52.4 | 52.19 |
| VIT_00s0309g00090.t01 | Wine grape | extracellular | 51.6 | 51.39 |
| Solyc08g077900.2.1 | Tomato | extracellular | 52.0 | 51.38 |
| PGSC0003DMT400067456 | Potato | extracellular | 51.2 | 50.59 |
| PGSC0003DMT400068379 | Potato | mitochondrion | 44.8 | 49.78 |
| KRH04218 | Soybean | extracellular | 49.6 | 49.6 |
| KRH04215 | Soybean | nucleus | 49.6 | 49.6 |
| Solyc06g060970.1.1 | Tomato | extracellular | 48.8 | 49.19 |
| KRH57508 | Soybean | endoplasmic reticulum | 46.0 | 47.13 |
| KRH04221 | Soybean | extracellular | 46.4 | 46.96 |
| KRH04220 | Soybean | endoplasmic reticulum | 46.4 | 46.77 |
| KRH57512 | Soybean | extracellular | 45.6 | 46.15 |
| PGSC0003DMT400067458 | Potato | extracellular | 44.8 | 44.62 |
| PGSC0003DMT400067459 | Potato | extracellular | 43.2 | 43.03 |
| Solyc08g077910.2.1 | Tomato | extracellular | 42.8 | 42.63 |
| CDY69288 | Canola | extracellular | 34.4 | 32.58 |
| CDY64278 | Canola | extracellular | 34.0 | 32.08 |
| CDY72634 | Canola | extracellular | 34.0 | 32.08 |
| CDY61895 | Canola | extracellular | 34.4 | 31.97 |
| CDY52801 | Canola | extracellular | 34.4 | 31.97 |
| CDY70406 | Canola | extracellular | 34.8 | 31.75 |
| CDY18951 | Canola | extracellular | 34.8 | 31.64 |
| CDX74710 | Canola | extracellular | 34.0 | 31.02 |
| CDY18948 | Canola | extracellular | 24.0 | 30.77 |
| CDY72345 | Canola | cytosol | 28.8 | 29.51 |
| CDY05789 | Canola | extracellular | 30.4 | 28.68 |
| CDY18990 | Canola | extracellular | 30.4 | 28.68 |
| CDX83404 | Canola | extracellular | 29.6 | 28.57 |
| CDX74711 | Canola | extracellular | 29.6 | 28.35 |
| CDY14888 | Canola | extracellular | 30.0 | 28.3 |
| CDY31940 | Canola | extracellular | 30.0 | 28.3 |
| CDY70556 | Canola | extracellular | 30.0 | 28.3 |
| CDY58728 | Canola | extracellular | 29.6 | 27.92 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 26.4 | 27.85 |
| CDX96901 | Canola | extracellular | 29.2 | 27.55 |
| CDY72655 | Canola | cytosol, plastid | 18.4 | 27.22 |
| CDY18946 | Canola | extracellular | 28.8 | 27.07 |
| CDY72505 | Canola | cytosol | 16.4 | 25.62 |
| CDX74713 | Canola | extracellular | 33.6 | 24.49 |
| CDX95627 | Canola | extracellular | 26.4 | 23.66 |
| CDY71186 | Canola | extracellular | 25.2 | 23.25 |
| CDX67835 | Canola | extracellular | 24.4 | 22.93 |
| CDY48362 | Canola | extracellular | 24.8 | 17.37 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.4 | GO:A0A078F9I0 | UniProt:A0A078F9I0 | EnsemblPlants:CDY09659 |
| ProteinID:CDY09659 | ProteinID:CDY09659.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | EnsemblPlantsGene:GSBRNA2T00031310001 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
| PANTHER:PTHR31692:SF10 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE4920 | SEG:seg | : | : |
Description
BnaC07g34020DBnaC07g34020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9I0]
Coordinates
chrLK031998:+:280366..282216
Molecular Weight (calculated)
27668.0 Da
IEP (calculated)
6.495
GRAVY (calculated)
-0.131
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKSHVLLLL LVQVIVLLPL LCLSDDFVSS RATYYGSPDC KGNPQGACGY GELGRDINDG EVSGVSSRLW KNGAGCGACY QVKCKIPPHC NEEGVYVVAT
101: DYGEGDGTDF IFSPKAYGSM ARPGTEFQLY SFGVVDVEYQ RVPCRYGGYN LVYKIHEKSY NPHHLAILIL YVGGVNDILA VEIWQEDCKE WKRMRRVFGA
201: VHDYQNPPRG TLSLRFLVYG SAGLNWVESQ NALPADWTAG ATYNSNILLS
101: DYGEGDGTDF IFSPKAYGSM ARPGTEFQLY SFGVVDVEYQ RVPCRYGGYN LVYKIHEKSY NPHHLAILIL YVGGVNDILA VEIWQEDCKE WKRMRRVFGA
201: VHDYQNPPRG TLSLRFLVYG SAGLNWVESQ NALPADWTAG ATYNSNILLS
001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Arabidopsis Description
EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.