CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036499.1-P	Field mustard	extracellular	100.0	100.0
CDY05789	Canola	extracellular	97.36	97.36
AT2G20750.1	Thale cress	extracellular	85.66	83.76
CDY70556	Canola	extracellular	73.58	73.58
CDY58728	Canola	extracellular	73.21	73.21
CDY18990	Canola	extracellular	72.83	72.83
VIT_12s0059g00190.t01	Wine grape	extracellular	63.4	64.86
PGSC0003DMT400055827	Potato	extracellular	63.4	64.12
KRH55988	Soybean	extracellular	64.53	64.04
KRH25552	Soybean	extracellular	64.53	64.04
KRH26935	Soybean	extracellular	63.02	63.98
Solyc10g008440.2.1	Tomato	extracellular	62.64	63.36
TraesCS6A01G235800.1	Wheat	extracellular	63.77	63.3
Os02t0639500-01	Rice	extracellular	62.26	63.22
GSMUA_AchrUn_...	Banana	extracellular	62.26	62.74
TraesCS6D01G218500.1	Wheat	extracellular	63.4	62.69
TraesCS6B01G264400.1	Wheat	extracellular	63.02	62.31
Solyc07g054170.2.1	Tomato	extracellular	62.64	62.17
PGSC0003DMT400047177	Potato	extracellular	62.26	61.8
Zm00001d017377_P001	Maize	extracellular	62.26	61.57
GSMUA_Achr5P12080_001	Banana	extracellular	61.89	61.42
GSMUA_Achr1P00120_001	Banana	extracellular	61.13	60.9
KRH22402	Soybean	extracellular	59.25	60.85
HORVU6Hr1G060410.7	Barley	extracellular	61.51	60.82
EES05488	Sorghum	extracellular	62.64	60.81
TraesCS2D01G369200.2	Wheat	extracellular	61.13	58.06
TraesCS2A01G373000.1	Wheat	extracellular	61.51	58.01
TraesCS2B01G390000.1	Wheat	extracellular	61.13	57.65
Zm00001d002860_P002	Maize	extracellular	62.26	54.1
CDY18950	Canola	cytosol, extracellular, plastid	38.11	42.62
CDY72345	Canola	cytosol	38.49	41.8
CDX74710	Canola	extracellular	41.89	40.51
CDX74711	Canola	extracellular	39.62	40.23
CDX83404	Canola	extracellular	39.25	40.15
CDY70406	Canola	extracellular	41.51	40.15
CDY18946	Canola	extracellular	39.25	39.1
CDY18948	Canola	extracellular	28.68	38.97
CDY18951	Canola	extracellular	40.0	38.55
CDY72505	Canola	cytosol	21.89	36.25
CDX96901	Canola	extracellular	36.23	36.23
CDY72655	Canola	cytosol, plastid	22.64	35.5
CDY14888	Canola	extracellular	35.47	35.47
CDY71186	Canola	extracellular	35.47	34.69
CDX95627	Canola	extracellular	36.23	34.41
CDX67835	Canola	extracellular	33.96	33.83
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	38.11	31.27
CDY09659	Canola	plasma membrane	28.3	30.0
CDY65447	Canola	extracellular	27.92	29.6
CDY42954	Canola	extracellular	27.92	29.6
CDY35606	Canola	extracellular	27.55	29.2
CDX74713	Canola	extracellular	37.74	29.15
CDX90493	Canola	cytosol, extracellular, nucleus	12.83	25.95
CDY48362	Canola	extracellular	34.72	25.77
CDY69288	Canola	extracellular	25.66	25.76
CDY52801	Canola	extracellular	25.66	25.28
CDY61895	Canola	extracellular	25.28	24.91
CDY72634	Canola	extracellular	24.91	24.91
CDY64278	Canola	extracellular	24.91	24.91

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	GO:A0A078GZT4	UniProt:A0A078GZT4	EnsemblPlants:CDY31940
ProteinID:CDY31940	ProteinID:CDY31940.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:GSBRNA2T00050720001
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF26	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI0000F35E6D	SEG:seg	:	:	:

Description

BnaA07g00550DBnaA07g00550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZT4]

Coordinates

chrLK032283:-:46886..48588

Molecular Weight (calculated)

28593.4 Da

IEP (calculated)

9.936

GRAVY (calculated)

-0.097

Length

265 amino acids

Sequence
(BLAST)

001: MQLLSTLCFL FLQLLSRGDA SASHSNRHRS APHWLPATAT WYGSPEGDGS SGGACGYGSL VDVKPFKARV GAVSPLLFKS GEGCGACYKV RCLDKTICSK
101: RAVTIIVTDQ SPSGPSARAK HTHFDLSGAA FGHLSIPGHS GIMRNRGLIS VLYRQTACKY REKNIAFHVN AGSTAYWLSL LIEYEDGEGD IGSMHIRQAG
201: SKEWIAMKHI WGANWCIVGG PLKGPLSVKL TTLSNNKTLS AADVIPKKWV PKATYTSRLN FSPVL

Best Arabidopsis Sequence Match ( AT2G20750.1 )
(BLAST)

001: MQLFPVILPT LCVFLHLLIS GSGSTPPLTH SNQQVAATRW LPATATWYGS AEGDGSSGGA CGYGSLVDVK PFKARVGAVS PILFKGGEGC GACYKVRCLD
101: KTICSKRAVT IIATDQSPSG PSAKAKHTHF DLSGAAFGHM AIPGHNGVIR NRGLLNILYR RTACKYRGKN IAFHVNAGST DYWLSLLIEY EDGEGDIGSM
201: HIRQAGSKEW ISMKHIWGAN WCIVEGPLKG PFSVKLTTLS NNKTLSATDV IPSNWVPKAT YTSRLNFSPV L

Arabidopsis Description

EXPB1Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.