Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047177 | Potato | extracellular | 97.75 | 97.75 |
| VIT_12s0059g00190.t01 | Wine grape | extracellular | 71.16 | 73.36 |
| Solyc10g008440.2.1 | Tomato | extracellular | 70.04 | 71.37 |
| GSMUA_AchrUn_... | Banana | extracellular | 69.66 | 70.72 |
| KRH55988 | Soybean | extracellular | 70.04 | 70.04 |
| KRH25552 | Soybean | extracellular | 68.91 | 68.91 |
| GSMUA_Achr5P12080_001 | Banana | extracellular | 68.54 | 68.54 |
| GSMUA_Achr1P00120_001 | Banana | extracellular | 68.16 | 68.42 |
| KRH26935 | Soybean | extracellular | 66.29 | 67.82 |
| Os02t0639500-01 | Rice | extracellular | 64.79 | 66.28 |
| Zm00001d017377_P001 | Maize | extracellular | 65.92 | 65.67 |
| CDY70556 | Canola | extracellular | 64.79 | 65.28 |
| CDY58728 | Canola | extracellular | 64.79 | 65.28 |
| Bra024215.1-P | Field mustard | extracellular | 64.79 | 65.28 |
| AT4G28250.1 | Thale cress | extracellular | 64.42 | 65.15 |
| TraesCS6D01G218500.1 | Wheat | extracellular | 65.17 | 64.93 |
| Bra026272.1-P | Field mustard | extracellular | 64.42 | 64.91 |
| TraesCS6A01G235800.1 | Wheat | extracellular | 64.79 | 64.79 |
| KRH22402 | Soybean | extracellular | 62.55 | 64.73 |
| CDY18990 | Canola | extracellular | 64.04 | 64.53 |
| EES05488 | Sorghum | extracellular | 65.92 | 64.47 |
| TraesCS6B01G264400.1 | Wheat | extracellular | 64.42 | 64.18 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 64.04 | 63.81 |
| CDY05789 | Canola | extracellular | 62.92 | 63.4 |
| AT2G20750.1 | Thale cress | extracellular | 64.04 | 63.1 |
| CDY31940 | Canola | extracellular | 62.17 | 62.64 |
| Bra036499.1-P | Field mustard | extracellular | 62.17 | 62.64 |
| TraesCS2D01G369200.2 | Wheat | extracellular | 62.55 | 59.86 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 62.55 | 59.43 |
| TraesCS2B01G390000.1 | Wheat | extracellular | 62.17 | 59.07 |
| Zm00001d002860_P002 | Maize | extracellular | 64.04 | 56.07 |
| Solyc01g090810.2.1 | Tomato | extracellular | 44.57 | 43.27 |
| Solyc10g018500.1.1 | Tomato | extracellular | 41.95 | 42.26 |
| Solyc01g090820.1.1 | Tomato | extracellular | 39.7 | 41.25 |
| Solyc05g052330.1.1 | Tomato | extracellular | 38.95 | 38.81 |
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 41.2 | 38.6 |
| Solyc07g049540.1.1 | Tomato | extracellular | 34.08 | 35.41 |
| Os04t0530100-01 | Rice | extracellular, mitochondrion, vacuole | 39.7 | 32.82 |
| Solyc06g060970.1.1 | Tomato | extracellular | 28.46 | 30.65 |
| Solyc08g077330.2.1 | Tomato | extracellular | 27.72 | 29.02 |
| Solyc08g077910.2.1 | Tomato | extracellular | 26.22 | 27.89 |
| Solyc08g077900.2.1 | Tomato | extracellular | 26.22 | 27.67 |
| Solyc01g112000.2.1 | Tomato | extracellular | 25.09 | 25.67 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.3 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006949 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | UniProt:K4CFW2 | InterPro:LolPI |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF5 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | EnsemblPlantsGene:Solyc07g054170.2 | EnsemblPlants:Solyc07g054170.2.1 | TMHMM:TMhelix | UniParc:UPI000276C3F8 | : |
Description
No Description!
Coordinates
chr7:+:62529846..62533102
Molecular Weight (calculated)
28987.6 Da
IEP (calculated)
8.714
GRAVY (calculated)
-0.053
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: METHSPNFSF TKLYSVVAVI VFFWPFMASA GPLRRVVDTH WYPATATWYG SPEGDGSTGG ACGYGSMVDV KPFRARVGAV SPILFKNGEG CGACYKVKCL
101: DRSVCSRRAA TVIITDECPG GYCSGGRVHF DLSGAAFGHM AVSGYGGSLR DRGVISILYR RTLCKYPGKN IAFHVNEGST PYWLSLLVEF EDGDGDVGSM
201: HIREARSNQW IEMSHLWGAN WAIIGGPLQG PFSVKLTTLS TGRALSARDV IPGNWSPKAT YTSRLNF
101: DRSVCSRRAA TVIITDECPG GYCSGGRVHF DLSGAAFGHM AVSGYGGSLR DRGVISILYR RTLCKYPGKN IAFHVNEGST PYWLSLLVEF EDGDGDVGSM
201: HIREARSNQW IEMSHLWGAN WAIIGGPLQG PFSVKLTTLS TGRALSARDV IPGNWSPKAT YTSRLNF
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Arabidopsis Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.