Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G235800.1 | Wheat | extracellular | 96.27 | 96.63 |
| TraesCS6B01G264400.1 | Wheat | extracellular | 96.27 | 96.27 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 95.15 | 95.15 |
| Os02t0639500-01 | Rice | extracellular | 84.7 | 86.97 |
| Zm00001d017377_P001 | Maize | extracellular | 83.96 | 83.96 |
| EES05488 | Sorghum | extracellular | 84.7 | 83.15 |
| GSMUA_AchrUn_... | Banana | extracellular | 72.76 | 74.14 |
| TraesCS2D01G369200.2 | Wheat | extracellular | 74.25 | 71.33 |
| GSMUA_Achr1P00120_001 | Banana | extracellular | 70.52 | 71.05 |
| GSMUA_Achr5P12080_001 | Banana | extracellular | 70.15 | 70.41 |
| VIT_12s0059g00190.t01 | Wine grape | extracellular | 67.54 | 69.88 |
| KRH26935 | Soybean | extracellular | 64.93 | 66.67 |
| Bra026272.1-P | Field mustard | extracellular | 65.3 | 66.04 |
| CDY18990 | Canola | extracellular | 64.93 | 65.66 |
| CDY58728 | Canola | extracellular | 64.93 | 65.66 |
| CDY70556 | Canola | extracellular | 64.93 | 65.66 |
| Bra024215.1-P | Field mustard | extracellular | 64.93 | 65.66 |
| Solyc07g054170.2.1 | Tomato | extracellular | 64.93 | 65.17 |
| AT4G28250.1 | Thale cress | extracellular | 64.18 | 65.15 |
| PGSC0003DMT400047177 | Potato | extracellular | 64.18 | 64.42 |
| CDY05789 | Canola | extracellular | 63.06 | 63.77 |
| Bra036499.1-P | Field mustard | extracellular | 62.69 | 63.4 |
| CDY31940 | Canola | extracellular | 62.69 | 63.4 |
| Solyc10g008440.2.1 | Tomato | extracellular | 61.94 | 63.36 |
| PGSC0003DMT400055827 | Potato | extracellular | 61.19 | 62.6 |
| KRH22402 | Soybean | extracellular | 59.7 | 62.02 |
| AT2G20750.1 | Thale cress | extracellular | 62.31 | 61.62 |
| KRH25552 | Soybean | extracellular | 60.45 | 60.67 |
| KRH55988 | Soybean | extracellular | 60.07 | 60.3 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 42.16 | 45.38 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 42.54 | 42.86 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 40.3 | 42.52 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 39.93 | 42.13 |
| TraesCS2D01G411200.1 | Wheat | extracellular | 40.3 | 41.38 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 39.18 | 41.34 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 38.81 | 39.69 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 35.07 | 39.33 |
| TraesCS2D01G411100.1 | Wheat | extracellular, plastid | 41.04 | 39.15 |
| TraesCS6D01G231300.1 | Wheat | extracellular | 42.16 | 39.1 |
| TraesCS3D01G000500.1 | Wheat | extracellular | 39.18 | 38.32 |
| TraesCS6D01G231200.1 | Wheat | extracellular | 40.67 | 37.98 |
| TraesCS3D01G482800.1 | Wheat | extracellular | 40.3 | 37.5 |
| TraesCS3D01G000400.1 | Wheat | cytosol | 28.36 | 37.44 |
| TraesCS6D01G037600.1 | Wheat | mitochondrion | 16.04 | 37.07 |
| TraesCS1D01G215300.1 | Wheat | extracellular | 37.31 | 36.5 |
| TraesCS1D01G215400.1 | Wheat | extracellular | 35.82 | 36.36 |
| TraesCS1D01G211500.1 | Wheat | extracellular | 35.82 | 36.23 |
| TraesCS6D01G037700.1 | Wheat | extracellular | 36.57 | 35.9 |
| TraesCS6D01G037500.1 | Wheat | extracellular | 36.57 | 35.9 |
| TraesCS2D01G459300.1 | Wheat | extracellular | 35.07 | 35.47 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 35.07 | 34.81 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 35.07 | 34.81 |
| TraesCS4D01G361900.1 | Wheat | extracellular | 38.06 | 34.34 |
| TraesCS3D01G476800.1 | Wheat | extracellular | 24.63 | 34.02 |
| TraesCS6D01G198400.1 | Wheat | extracellular | 37.69 | 33.78 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 33.58 | 33.58 |
| TraesCS3D01G476700.1 | Wheat | extracellular | 37.69 | 32.9 |
| TraesCS3D01G474800.1 | Wheat | extracellular | 38.43 | 32.8 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 37.31 | 32.47 |
| TraesCS1D01G215500.1 | Wheat | extracellular | 37.69 | 32.06 |
| TraesCS1D01G215100.1 | Wheat | plastid | 33.58 | 31.8 |
| TraesCS4D01G361700.1 | Wheat | extracellular | 37.31 | 31.65 |
| TraesCS1D01G215200.1 | Wheat | extracellular, mitochondrion, nucleus, plastid | 36.19 | 30.89 |
| TraesCS5D01G086000.1 | Wheat | extracellular, plasma membrane | 37.31 | 28.82 |
| TraesCS1D01G206700.1 | Wheat | extracellular | 27.99 | 26.5 |
| TraesCS4D01G323600.1 | Wheat | extracellular | 26.49 | 25.63 |
| TraesCS4D01G324000.1 | Wheat | extracellular | 25.75 | 25.27 |
| TraesCS7D01G532200.1 | Wheat | extracellular | 29.1 | 25.24 |
| TraesCS4D01G323900.1 | Wheat | golgi | 25.37 | 25.09 |
| TraesCS4D01G323800.2 | Wheat | extracellular | 26.49 | 23.51 |
| TraesCS7D01G532500.1 | Wheat | extracellular | 27.61 | 23.05 |
| TraesCS7D01G532400.1 | Wheat | extracellular | 26.12 | 22.73 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.3 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
| PANTHER:PTHR31692:SF5 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G218500 | EnsemblPlants:TraesCS6D01G218500.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6D:+:308785021..308790140
Molecular Weight (calculated)
28503.0 Da
IEP (calculated)
8.744
GRAVY (calculated)
0.029
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGSATSSS WALLLVSILS AAFLFGVGDA GAVHKVVDPE WHQATATWYG SAEGDGSDGG ACGYGTLVDV VPMKARVGAV SPVLFKAGEG CGACYKVRCL
101: DRGICSRRAV TVIVTDECPG GYCSLGRTHF DLSGAAFGRL AVAGHGGQLR NRGEISVVFR RTPCKYRGKN IAFRVVEGST SFWLSLLVEF EDGDGDIGSM
201: QLKQANSAQW QDMKHIWGAT WSLTPGPLVG PFSVRLTTLT TKKTLSAQDV IPRNWTPKAT YTSRLNFA
101: DRGICSRRAV TVIVTDECPG GYCSLGRTHF DLSGAAFGRL AVAGHGGQLR NRGEISVVFR RTPCKYRGKN IAFRVVEGST SFWLSLLVEF EDGDGDIGSM
201: QLKQANSAQW QDMKHIWGAT WSLTPGPLVG PFSVRLTTLT TKKTLSAQDV IPRNWTPKAT YTSRLNFA
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Arabidopsis Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.