Factsheet for TraesCS4D01G361700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	50.95	100.0
TraesCS4B01G375600.1	Wheat	extracellular	98.73	91.5
TraesCS3D01G000400.1	Wheat	cytosol	53.8	83.74
TraesCS3D01G000500.1	Wheat	extracellular	70.57	81.39
Os03t0102700-01	Rice	plastid	66.14	74.91
HORVU4Hr1G088080.4	Barley	plastid	94.3	73.95
TraesCS6D01G198400.1	Wheat	extracellular	69.94	73.91
KXG40416	Sorghum	extracellular, vacuole	71.2	70.31
TraesCS3D01G474800.1	Wheat	extracellular	68.35	68.79
TraesCS3D01G476700.1	Wheat	extracellular	66.77	68.73
TraesCS3D01G476800.1	Wheat	extracellular	41.46	67.53
Zm00001d027283_P001	Maize	extracellular	67.41	66.98
TraesCS6D01G037600.1	Wheat	mitochondrion	24.37	66.38
TraesCS1D01G215400.1	Wheat	extracellular	54.75	65.53
TraesCS6D01G037700.1	Wheat	extracellular	56.01	64.84
TraesCS6D01G037500.1	Wheat	extracellular	56.01	64.84
TraesCS1D01G215300.1	Wheat	extracellular	54.43	62.77
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	65.19	59.37
TraesCS4D01G361900.1	Wheat	extracellular	53.48	56.9
TraesCS1D01G215100.1	Wheat	plastid	47.78	53.36
TraesCS1D01G211500.1	Wheat	extracellular	43.67	52.08
TraesCS1D01G215500.1	Wheat	extracellular	51.9	52.06
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	50.63	50.96
TraesCS2D01G459300.1	Wheat	extracellular	41.46	49.43
TraesCS2D01G592900.1	Wheat	extracellular	38.92	49.4
TraesCS2D01G078900.1	Wheat	extracellular	39.56	49.21
TraesCS2D01G411000.1	Wheat	extracellular	39.87	48.09
TraesCS4D01G355800.1	Wheat	extracellular	40.51	47.41
TraesCS4D01G355100.1	Wheat	extracellular	40.51	47.41
TraesCS6D01G231400.1	Wheat	extracellular	39.56	46.99
TraesCS2D01G078800.1	Wheat	extracellular	37.34	46.46
TraesCS2D01G411200.1	Wheat	extracellular	38.29	46.36
TraesCS2D01G104800.1	Wheat	extracellular	37.03	46.06
TraesCS4D01G355700.1	Wheat	extracellular	38.92	45.9
GSMUA_AchrUn_...	Banana	extracellular	13.29	45.65
TraesCS2D01G078600.1	Wheat	extracellular	33.54	44.35
TraesCS6D01G231200.1	Wheat	extracellular	37.97	41.81
TraesCS2D01G411100.1	Wheat	extracellular, plastid	36.71	41.28
TraesCS5D01G384200.1	Wheat	extracellular	39.56	40.58
TraesCS6D01G231300.1	Wheat	extracellular	36.39	39.79
TraesCS3D01G482800.1	Wheat	extracellular	35.76	39.24
TraesCS6D01G218500.1	Wheat	extracellular	31.65	37.31
TraesCS2D01G369200.2	Wheat	extracellular	32.59	36.92
TraesCS4D01G323900.1	Wheat	golgi	22.78	26.57
TraesCS4D01G323600.1	Wheat	extracellular	22.47	25.63
TraesCS4D01G324000.1	Wheat	extracellular	21.84	25.27
TraesCS1D01G206700.1	Wheat	extracellular	21.84	24.38
TraesCS4D01G323800.2	Wheat	extracellular	21.52	22.52
TraesCS7D01G532400.1	Wheat	extracellular	19.62	20.13
TraesCS7D01G532500.1	Wheat	extracellular	19.3	19.0
TraesCS7D01G532200.1	Wheat	extracellular	18.04	18.45

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4D01G361700	EnsemblPlants:TraesCS4D01G361700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:-:508431333..508432960

Molecular Weight (calculated)

33457.3 Da

IEP (calculated)

6.218

GRAVY (calculated)

-0.281

Length

316 amino acids

Sequence
(BLAST)

001: MASSSSSVAI AAALLLCILA AHGHGCCAKR SGGGGKKAHS HHAPPHAHVG SPPPPAAIPP PPAANSSSNS TNVDAGGWLD ARATWYGAPK GAGPDDNGGA
101: CGFKNVNLPP FSAMTSCGNE PLFKDGKGCG SCYQIRCVSA GHPACSGVPE TVIITDMNYY PVSRFHFDLS GTAFGAMAKD GRNDELRHAG IIDMQFRRVP
201: CQYPGLTVTF HVQHGSNPYY LAILVEYENG DGDVDQVDIM QSRPDVAGEG GMAPTGEWVP MTESWGSIWR MDTRRPMQGP FSLRITNESG KTLVADQVIP
301: ADWEPNEIYS SIIQFD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.