Factsheet for TraesCS2D01G078800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G009600.1	Wheat	extracellular	95.28	95.65
TraesCS2B01G095700.1	Wheat	extracellular	91.73	92.46
TraesCS2D01G078900.1	Wheat	extracellular	79.92	79.92
TraesCS2D01G104800.1	Wheat	extracellular	77.95	77.95
TraesCS2D01G592900.1	Wheat	extracellular	75.2	76.71
TraesCS2D01G078600.1	Wheat	extracellular	68.5	72.8
HORVU2Hr1G013340.1	Barley	extracellular	79.92	69.52
Zm00001d017493_P001	Maize	extracellular	67.32	64.04
Zm00001d045861_P001	Maize	mitochondrion	65.75	63.02
EES07509	Sorghum	extracellular	65.35	62.88
Zm00001d045792_P001	Maize	extracellular	65.75	61.85
Zm00001d051368_P001	Maize	extracellular	38.19	61.39
KXG19818	Sorghum	extracellular	62.2	61.0
TraesCS6D01G231400.1	Wheat	extracellular	63.78	60.9
EER88254	Sorghum	extracellular	61.81	60.62
Os02t0658600-00	Rice	plastid	64.57	60.07
TraesCS2D01G411000.1	Wheat	extracellular	61.42	59.54
VIT_15s0021g02670.t01	Wine grape	extracellular	59.45	55.31
VIT_15s0021g02700.t01	Wine grape	extracellular	59.45	55.31
GSMUA_AchrUn_...	Banana	extracellular	57.48	55.3
GSMUA_Achr4P26910_001	Banana	extracellular	58.66	54.78
PGSC0003DMT400048506	Potato	plastid	41.34	54.12
TraesCS2D01G411100.1	Wheat	extracellular, plastid	59.84	54.09
Bra000370.1-P	Field mustard	extracellular	54.72	53.67
CDX83404	Canola	extracellular	54.72	53.67
CDY18950	Canola	cytosol, extracellular, plastid	50.0	53.59
AT2G45110.1	Thale cress	extracellular	54.33	53.28
CDY72345	Canola	cytosol	51.18	53.28
CDY72655	Canola	cytosol, plastid	35.43	53.25
Solyc01g090810.2.1	Tomato	extracellular	57.48	53.09
TraesCS2D01G411200.1	Wheat	extracellular	54.33	52.87
KRH33426	Soybean	extracellular	56.3	52.57
CDY72505	Canola	cytosol	33.07	52.5
CDX74711	Canola	extracellular	53.54	52.11
AT1G65681.1	Thale cress	cytosol	44.88	51.12
Bra035987.1-P	Field mustard	extracellular	53.15	50.94
CDX96901	Canola	extracellular	53.15	50.94
CDY14888	Canola	extracellular	53.15	50.94
CDY18946	Canola	extracellular	52.36	50.0
KRG88934	Soybean	extracellular, vacuole	53.94	49.46
CDY18948	Canola	extracellular	37.8	49.23
TraesCS6D01G231200.1	Wheat	extracellular	55.51	49.13
KRH75302	Soybean	extracellular	53.54	49.1
AT1G65680.1	Thale cress	extracellular	51.97	48.35
KRH33423	Soybean	extracellular	52.36	48.01
TraesCS5D01G384200.1	Wheat	extracellular	57.48	47.4
VIT_09s0002g08510.t01	Wine grape	extracellular	51.97	47.31
Solyc01g090820.1.1	Tomato	extracellular	47.64	47.08
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	24.02	46.92
CDY18951	Canola	extracellular	50.79	46.91
KRH65410	Soybean	extracellular	49.21	46.82
Solyc10g018500.1.1	Tomato	extracellular	48.82	46.79
CDX74710	Canola	extracellular	49.61	45.99
CDY70406	Canola	extracellular	49.61	45.99
Bra004889.1-P	Field mustard	extracellular	49.61	45.82
TraesCS6D01G231300.1	Wheat	extracellular	51.97	45.67
Solyc03g093390.2.1	Tomato	extracellular, nucleus	51.18	45.61
CDX95627	Canola	extracellular	50.0	45.52
Solyc07g049540.1.1	Tomato	extracellular	45.67	45.14
TraesCS3D01G482800.1	Wheat	extracellular	50.79	44.79
Solyc05g052330.1.1	Tomato	extracellular	47.24	44.78
PGSC0003DMT400095086	Potato	plastid	43.7	44.4
TraesCS1D01G215400.1	Wheat	extracellular	46.06	44.32
TraesCS1D01G215300.1	Wheat	extracellular	46.06	42.7
AT3G60570.1	Thale cress	extracellular	44.09	42.42
TraesCS6D01G037700.1	Wheat	extracellular	45.28	42.12
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	22.83	42.03
TraesCS3D01G476800.1	Wheat	extracellular	31.89	41.75
TraesCS3D01G000500.1	Wheat	extracellular	44.88	41.61
TraesCS2D01G459300.1	Wheat	extracellular	43.31	41.51
TraesCS3D01G000400.1	Wheat	cytosol	33.07	41.38
TraesCS6D01G037600.1	Wheat	mitochondrion	18.9	41.38
TraesCS6D01G037500.1	Wheat	extracellular	43.7	40.66
Bra003421.1-P	Field mustard	extracellular	42.52	40.6
CDX67835	Canola	extracellular	42.52	40.6
TraesCS1D01G211500.1	Wheat	extracellular	42.13	40.38
CDY71186	Canola	extracellular	42.52	39.85
Bra004890.1-P	Field mustard	extracellular	49.21	39.31
TraesCS6D01G218500.1	Wheat	extracellular	41.34	39.18
TraesCS6D01G198400.1	Wheat	extracellular	46.06	39.13
TraesCS3D01G476700.1	Wheat	extracellular	46.85	38.76
TraesCS4D01G361900.1	Wheat	extracellular	44.88	38.38
TraesCS3D01G474800.1	Wheat	extracellular	46.46	37.58
TraesCS4D01G361700.1	Wheat	extracellular	46.46	37.34
TraesCS2D01G369200.2	Wheat	extracellular	40.94	37.28
TraesCS1D01G215100.1	Wheat	plastid	40.94	36.75
TraesCS4D01G355100.1	Wheat	extracellular	38.98	36.67
TraesCS4D01G355800.1	Wheat	extracellular	38.98	36.67
CDX74713	Canola	extracellular	49.21	36.44
TraesCS1D01G215500.1	Wheat	extracellular	44.88	36.19
TraesCS4D01G355700.1	Wheat	extracellular	37.8	35.82
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	42.91	34.71
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	46.46	34.01
TraesCS4D01G324000.1	Wheat	extracellular	31.89	29.67
CDY48362	Canola	extracellular	41.34	29.41
TraesCS4D01G323600.1	Wheat	extracellular	31.89	29.24
Bra014484.1-P	Field mustard	extracellular	41.34	29.17
TraesCS4D01G323900.1	Wheat	golgi	30.71	28.78
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	51.57	28.54
TraesCS4D01G323800.2	Wheat	extracellular	31.1	26.16
TraesCS1D01G206700.1	Wheat	extracellular	28.74	25.8
TraesCS7D01G532200.1	Wheat	extracellular	26.38	21.68
TraesCS7D01G532500.1	Wheat	extracellular	27.17	21.5
TraesCS7D01G532400.1	Wheat	extracellular	25.2	20.78

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF27	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G078800	EnsemblPlants:TraesCS2D01G078800.1	SEG:seg	:

Description

No Description!

Coordinates

chr2D:-:33849351..33850529

Molecular Weight (calculated)

26742.8 Da

IEP (calculated)

7.604

GRAVY (calculated)

0.045

Length

254 amino acids

Sequence
(BLAST)

001: MASSSFAALA ALAMSCLLIL LPCSVSGWSH GGATWYVPPE GAGTDGGACG YQHDVERPPF SAMITAGGPS IFKNGKGCGA CYQVRCTGNA ACSGFPVTVV
101: VTDECRGGPC LAEAAHFDLS GKAFGAMAKL GQADNLRKAG SIRVHYNRVP CNWHGLDIVF KVDACSNPNY LAVLIEYEAG DGDLSAVELQ QRDIGWASMQ
201: ELSGAVWKYS SRSTLQAPIS IRLTSGSGKQ LIASNVIPSG WQAGRTYRSI VNYY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.