Factsheet for TraesCSU01G009600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G078800.1	Wheat	extracellular	95.65	95.28
TraesCS2B01G095700.1	Wheat	extracellular	91.7	92.06
HORVU2Hr1G013340.1	Barley	extracellular	81.03	70.21
Zm00001d017493_P001	Maize	extracellular	68.77	65.17
EES07509	Sorghum	extracellular	67.59	64.77
Zm00001d045861_P001	Maize	mitochondrion	66.4	63.4
Zm00001d051368_P001	Maize	extracellular	39.13	62.66
Zm00001d045792_P001	Maize	extracellular	66.4	62.22
Os02t0658600-00	Rice	plastid	66.8	61.9
KXG19818	Sorghum	extracellular	63.24	61.78
EER88254	Sorghum	extracellular	62.85	61.39
GSMUA_AchrUn_...	Banana	extracellular	58.89	56.44
VIT_15s0021g02670.t01	Wine grape	extracellular	59.68	55.31
GSMUA_Achr4P26910_001	Banana	extracellular	59.29	55.15
CDY72655	Canola	cytosol, plastid	36.76	55.03
CDY18950	Canola	cytosol, extracellular, plastid	51.38	54.85
CDX83404	Canola	extracellular	56.13	54.83
Bra000370.1-P	Field mustard	extracellular	56.13	54.83
VIT_15s0021g02700.t01	Wine grape	extracellular	58.89	54.58
CDY72345	Canola	cytosol	52.57	54.51
AT2G45110.1	Thale cress	extracellular	55.73	54.44
CDY72505	Canola	cytosol	34.39	54.38
CDX74711	Canola	extracellular	54.94	53.26
PGSC0003DMT400048506	Potato	plastid	40.71	53.09
KRH33426	Soybean	extracellular	56.92	52.94
Solyc01g090810.2.1	Tomato	extracellular	56.52	52.0
CDY14888	Canola	extracellular	54.15	51.7
CDX96901	Canola	extracellular	54.15	51.7
Bra035987.1-P	Field mustard	extracellular	54.15	51.7
AT1G65681.1	Thale cress	cytosol	45.45	51.57
CDY18946	Canola	extracellular	53.75	51.13
KRG88934	Soybean	extracellular, vacuole	54.94	50.18
KRH75302	Soybean	extracellular	54.55	49.82
KRH33423	Soybean	extracellular	53.36	48.74
CDY18948	Canola	extracellular	37.55	48.72
Solyc01g090820.1.1	Tomato	extracellular	48.62	47.86
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	24.51	47.69
Solyc10g018500.1.1	Tomato	extracellular	49.8	47.55
VIT_09s0002g08510.t01	Wine grape	extracellular	52.17	47.31
AT1G65680.1	Thale cress	extracellular	50.99	47.25
KRH65410	Soybean	extracellular	49.8	47.19
CDX95627	Canola	extracellular	51.38	46.59
CDY18951	Canola	extracellular	50.59	46.55
TraesCSU01G085500.1	Wheat	cytosol	35.97	46.43
TraesCSU01G216000.1	Wheat	cytosol	28.06	46.41
Solyc03g093390.2.1	Tomato	extracellular, nucleus	50.99	45.26
CDY70406	Canola	extracellular	49.01	45.26
CDX74710	Canola	extracellular	49.01	45.26
Solyc05g052330.1.1	Tomato	extracellular	47.83	45.15
Solyc07g049540.1.1	Tomato	extracellular	45.85	45.14
Bra004889.1-P	Field mustard	extracellular	49.01	45.09
PGSC0003DMT400095086	Potato	plastid	43.08	43.6
TraesCSU01G271700.1	Wheat	cytosol	17.79	43.27
TraesCSU01G236100.1	Wheat	cytosol	17.79	43.27
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	23.32	42.75
AT3G60570.1	Thale cress	extracellular	44.27	42.42
Bra003421.1-P	Field mustard	extracellular	43.48	41.35
CDX67835	Canola	extracellular	43.48	41.35
CDY71186	Canola	extracellular	43.48	40.59
Bra004890.1-P	Field mustard	extracellular	49.01	38.99
CDX74713	Canola	extracellular	49.01	36.15
CDY48362	Canola	extracellular	42.69	30.25
Bra014484.1-P	Field mustard	extracellular	42.69	30.0
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	50.59	27.89
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	26.48	21.75
TraesCSU01G099100.1	Wheat	extracellular, golgi	24.51	19.87

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF27	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCSU01G009600	EnsemblPlants:TraesCSU01G009600.1	SEG:seg	:

Description

No Description!

Coordinates

chrUn:-:12881867..12883011

Molecular Weight (calculated)

26464.4 Da

IEP (calculated)

8.087

GRAVY (calculated)

-0.020

Length

253 amino acids

Sequence
(BLAST)

001: MASSSFAALA ALAMSCLLIL LPCSVSGWSH GGATWYVPPE GAGTDGGACG YQRDVEKPPF SAMITAGSPS IFKNGKGCGG CYQVRCTGNA ACSGFPVTVV
101: VTDECRGGPC LAEAAHFDLS GKAFGAMAKP GQADNLRKAG SIRVHYNRVP CNWHGMDIVF KVDAGSNPNY LAVLIEYEAG DGDLSAVELQ QRGGGWASMQ
201: ELSGAVWKYN SRSTLQAPIS IRLTSGSGKQ LIASNVIPSG WHAGRTYRSI VNY

Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)

001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF

Arabidopsis Description

EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.