Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G271700.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS6D01G037600.1 | Wheat | mitochondrion | 96.15 | 86.21 |
| TraesCSU01G216000.1 | Wheat | cytosol | 100.0 | 67.97 |
| TraesCSU01G085500.1 | Wheat | cytosol | 92.31 | 48.98 |
| GSMUA_AchrUn_... | Banana | extracellular | 39.42 | 44.57 |
| TraesCS6D01G037500.1 | Wheat | extracellular | 96.15 | 36.63 |
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 29.81 | 22.46 |
| TraesCSU01G009600.1 | Wheat | extracellular | 43.27 | 17.79 |
| TraesCSU01G099100.1 | Wheat | extracellular, golgi | 21.15 | 7.05 |
| TraesCSU01G099200.1 | Wheat | endoplasmic reticulum, extracellular | 20.19 | 6.82 |
Protein Annotations
| Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:LolPI |
| PFAM:PF01357 | PRINTS:PR00829 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF19 | SUPFAM:SSF49590 |
| EnsemblPlantsGene:TraesCSU01G236100 | EnsemblPlants:TraesCSU01G236100.1 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:348953592..348953906
Molecular Weight (calculated)
11965.3 Da
IEP (calculated)
10.341
GRAVY (calculated)
-0.473
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVTFHVQRG SNPNYLAVLV EYADVDGTVV RMELMQTRNG RPTGFWEPMR RSWGSIWRMD TSRPLQGAFS MRITSDSGKT LVANNVIPAY WRPDKAYGSN
101: VQFY
101: VQFY
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.