Factsheet for TraesCSU01G099200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	89.61	86.52
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	87.66	83.59
TraesCSU01G099100.1	Wheat	extracellular, golgi	65.58	64.74
Os06t0725300-01	Rice	endoplasmic reticulum	53.25	52.4
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	46.75	45.14
GSMUA_Achr11P...	Banana	extracellular	37.99	43.98
KRH24119	Soybean	extracellular	37.01	43.68
KRH29091	Soybean	extracellular	36.69	43.63
Solyc01g112000.2.1	Tomato	extracellular	34.74	41.0
GSMUA_Achr11P...	Banana	extracellular	35.06	40.75
GSMUA_Achr5P11590_001	Banana	extracellular	34.42	40.61
CDY69288	Canola	extracellular	34.74	40.53
Bra033563.1-P	Field mustard	extracellular	34.74	40.53
GSMUA_AchrUn_...	Banana	extracellular	24.68	40.43
GSMUA_Achr5P19030_001	Banana	extracellular	34.42	40.15
PGSC0003DMT400047948	Potato	extracellular	33.77	40.0
VIT_03s0038g03430.t01	Wine grape	extracellular	33.44	39.77
CDY72634	Canola	extracellular	34.09	39.62
CDY64278	Canola	extracellular	34.09	39.62
CDY52801	Canola	extracellular	34.42	39.41
Bra011899.1-P	Field mustard	extracellular	34.09	39.03
CDY61895	Canola	extracellular	34.09	39.03
AT4G38400.1	Thale cress	extracellular	33.12	38.49
AT3G45960.2	Thale cress	extracellular	32.14	37.64
AT3G45970.1	Thale cress	extracellular	31.82	36.98
KXG20919	Sorghum	plastid	50.0	34.76
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	34.42	34.53
TraesCSU01G009600.1	Wheat	extracellular	21.75	26.48
TraesCSU01G085500.1	Wheat	cytosol	14.29	22.45
TraesCSU01G216000.1	Wheat	cytosol	11.04	22.22
TraesCSU01G236100.1	Wheat	cytosol	6.82	20.19
TraesCSU01G271700.1	Wheat	cytosol	6.82	20.19

Protein Annotations

EnsemblPlants:TraesCSU01G099200.1	EnsemblPlantsGene:TraesCSU01G099200	Gene3D:2.40.40.10	Gene3D:2.60.40.760	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:RlpA-like_sf
PANTHER:PTHR31692	PANTHER:PTHR31692:SF25	PFAM:PF01357	PFscan:PS50842	PFscan:PS50843	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF49590	SUPFAM:SSF50685	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrUn:+:87863154..87864498

Molecular Weight (calculated)

32058.1 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.024

Length

308 amino acids

Sequence
(BLAST)

001: MAALPQLLLT LLILLLASTP AARASSVTYR CGWCPRRSTA SILPPGAGAL TGAACGYGGQ AAEMAVDGGF HIAAVSAGFF RGGQACGACY QLRCRSRSAC
101: AKDGVKIVVV GEVADTNMTG GGAGGRFLLT KDAFAAMTMP DRAAELADAA VDVDFRRIPC AYKSKNLAVK VEETSSRDRG YLALRYLYQG GQTDIAAVEV
201: AQAVTGSSGT NNEAAPSQTT WQYMTRREAS PSVWRTSRVP AGPLRLRLVV TAGSSGKWLR TDGAVLPAEW QPGAVYDTGL RITDVAANTC GGASCSSTDE
301: GDDAEQLR

Best Arabidopsis Sequence Match ( AT3G45970.2 )
(BLAST)

001: MFLFSCLVYV FFAAGACAYG SMATSFFAGH IAAAIPSIYK DGAGCGACFQ VRCKNPKLCS TKGTIVMITD LNKSNQTDLV LSSRAFRAMA KPIVGADKDL
101: LKQGIVDIEY QRVPCDYGNK NMNVRVEEAS KKPNYLEIKL LYQGGQTEVV SIDIAQVGSS PNWGYMTRSH GAVWVTDKVP TGAIQFRFVV TGGYDGKMIW
201: SQSVLPSNWE AGKIYDAGVQ ITDIAQEGCD PCDAHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.