Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- plastid 2
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G45960.2 | Thale cress | extracellular | 85.66 | 86.31 |
| CDY69288 | Canola | extracellular | 85.66 | 85.98 |
| Bra033563.1-P | Field mustard | extracellular | 85.66 | 85.98 |
| CDY72634 | Canola | extracellular | 85.66 | 85.66 |
| CDY64278 | Canola | extracellular | 85.66 | 85.66 |
| AT4G38400.1 | Thale cress | extracellular | 85.28 | 85.28 |
| Bra011899.1-P | Field mustard | extracellular | 85.28 | 84.01 |
| CDY61895 | Canola | extracellular | 85.28 | 84.01 |
| CDY52801 | Canola | extracellular | 84.91 | 83.64 |
| PGSC0003DMT400047948 | Potato | extracellular | 64.15 | 65.38 |
| KRH24119 | Soybean | extracellular | 64.15 | 65.13 |
| KRH29091 | Soybean | extracellular | 62.64 | 64.09 |
| Solyc01g112000.2.1 | Tomato | extracellular | 62.26 | 63.22 |
| VIT_03s0038g03430.t01 | Wine grape | extracellular | 61.51 | 62.93 |
| GSMUA_Achr11P... | Banana | extracellular | 59.25 | 59.02 |
| GSMUA_Achr5P19030_001 | Banana | extracellular | 58.49 | 58.71 |
| GSMUA_Achr5P11590_001 | Banana | extracellular | 55.85 | 56.7 |
| TraesCS4B01G326900.1 | Wheat | extracellular | 55.47 | 53.45 |
| EER95568 | Sorghum | extracellular | 54.34 | 53.33 |
| TraesCS5A01G498900.1 | Wheat | extracellular | 55.09 | 53.09 |
| TraesCS4D01G323600.1 | Wheat | extracellular | 55.47 | 53.07 |
| GSMUA_AchrUn_... | Banana | extracellular | 37.36 | 52.66 |
| TraesCS4B01G327200.1 | Wheat | extracellular | 53.21 | 52.61 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 55.09 | 52.14 |
| GSMUA_Achr11P... | Banana | extracellular | 52.08 | 52.08 |
| Zm00001d048344_P002 | Maize | extracellular | 53.21 | 51.46 |
| Zm00001d027520_P001 | Maize | extracellular | 53.96 | 51.44 |
| TraesCS4D01G323900.1 | Wheat | golgi | 52.45 | 51.29 |
| TraesCS4D01G324000.1 | Wheat | extracellular | 52.83 | 51.28 |
| TraesCS5A01G499300.1 | Wheat | nucleus | 52.83 | 51.28 |
| Os10t0542400-01 | Rice | extracellular | 53.21 | 51.27 |
| Zm00001d029783_P003 | Maize | extracellular | 51.7 | 49.82 |
| GSMUA_Achr1P02170_001 | Banana | extracellular, peroxisome, plastid | 57.36 | 49.51 |
| Os03t0132200-01 | Rice | extracellular, plastid | 52.08 | 49.46 |
| TraesCS5A01G499100.1 | Wheat | extracellular | 46.04 | 48.8 |
| TraesCS4B01G327100.1 | Wheat | golgi | 49.81 | 48.71 |
| TraesCS5A01G499200.1 | Wheat | extracellular | 48.3 | 48.67 |
| KXG38992 | Sorghum | extracellular | 51.7 | 48.58 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 54.72 | 48.49 |
| TraesCS1B01G217200.1 | Wheat | extracellular | 49.81 | 48.0 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 49.81 | 47.65 |
| TraesCS1A01G203200.1 | Wheat | extracellular | 49.81 | 46.81 |
| TraesCS1D01G206700.1 | Wheat | extracellular | 49.06 | 45.94 |
| Os07t0475400-01 | Rice | extracellular | 47.17 | 45.29 |
| EER99370 | Sorghum | extracellular | 46.42 | 44.89 |
| TraesCS4D01G323800.2 | Wheat | extracellular | 50.57 | 44.37 |
| Zm00001d006360_P001 | Maize | extracellular | 45.28 | 44.12 |
| AT4G17030.1 | Thale cress | extracellular | 32.08 | 34.0 |
| TraesCSU01G099200.1 | Wheat | endoplasmic reticulum, extracellular | 36.98 | 31.82 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 36.98 | 31.72 |
| TraesCS7A01G545900.1 | Wheat | extracellular | 36.6 | 31.39 |
| TraesCS7B01G468700.1 | Wheat | endoplasmic reticulum, extracellular | 37.36 | 31.33 |
| TraesCS7A01G545800.1 | Wheat | extracellular | 35.47 | 31.23 |
| TraesCS7A01G546300.1 | Wheat | endoplasmic reticulum, extracellular | 37.74 | 31.15 |
| TraesCS7D01G532200.1 | Wheat | extracellular | 36.23 | 31.07 |
| TraesCS7B01G469200.1 | Wheat | endoplasmic reticulum, extracellular | 37.36 | 31.03 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 36.98 | 31.01 |
| TraesCS7D01G532400.1 | Wheat | extracellular | 35.47 | 30.52 |
| TraesCS7A01G546000.1 | Wheat | endoplasmic reticulum, extracellular | 36.98 | 30.34 |
| TraesCS7D01G532500.1 | Wheat | extracellular | 36.6 | 30.22 |
| Os06t0725300-01 | Rice | endoplasmic reticulum | 34.72 | 29.39 |
| TraesCSU01G099100.1 | Wheat | extracellular, golgi | 34.34 | 29.17 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 34.34 | 29.07 |
| AT1G65681.1 | Thale cress | cytosol | 24.15 | 28.7 |
| Zm00001d014826_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 33.96 | 28.21 |
| AT1G65680.1 | Thale cress | extracellular | 29.06 | 28.21 |
| AT2G20750.1 | Thale cress | extracellular | 26.42 | 25.83 |
| AT2G45110.1 | Thale cress | extracellular | 24.53 | 25.1 |
| AT4G28250.1 | Thale cress | extracellular | 24.91 | 25.0 |
| AT3G60570.1 | Thale cress | extracellular | 24.53 | 24.62 |
| KXG20919 | Sorghum | plastid | 36.6 | 21.9 |
| TraesCS7B01G469100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 35.09 | 14.44 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.2 | EntrezGene:823740 | ProteinID:AEE78096.1 | EMBL:AF378896 |
| ArrayExpress:AT3G45970 | EnsemblPlantsGene:AT3G45970 | RefSeq:AT3G45970 | TAIR:AT3G45970 | RefSeq:AT3G45970-TAIR-G | EnsemblPlants:AT3G45970.1 |
| TAIR:AT3G45970.1 | Symbol:ATEXLA1 | EMBL:AY052745 | EMBL:AY058142 | Unigene:At.4757 | ProteinID:CAB82821.1 |
| InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0009505 |
| GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030312 | InterPro:IPR007112 | InterPro:IPR007117 |
| InterPro:IPR036749 | InterPro:IPR036908 | RefSeq:NP_190183.1 | PFAM:PF01357 | PFAM:PF03330 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF4 | UniProt:Q9LZT4 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000012A358 | SEG:seg | : | : | : |
Description
EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
Coordinates
chr3:+:16896166..16897308
Molecular Weight (calculated)
28703.4 Da
IEP (calculated)
8.079
GRAVY (calculated)
0.031
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.