Factsheet for GSMUA_Achr11P01300_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular	77.44	77.74
GSMUA_Achr5P19030_001	Banana	extracellular	77.07	77.65
GSMUA_Achr5P11590_001	Banana	extracellular	72.93	74.33
GSMUA_AchrUn_...	Banana	extracellular	48.5	68.62
KRH29091	Soybean	extracellular	64.29	66.02
KRH24119	Soybean	extracellular	64.29	65.52
VIT_03s0038g03430.t01	Wine grape	extracellular	62.41	64.09
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	72.93	63.19
TraesCS4B01G327200.1	Wheat	extracellular	62.78	62.31
PGSC0003DMT400047948	Potato	extracellular	60.53	61.92
EER95568	Sorghum	extracellular	62.41	61.48
TraesCS4B01G326900.1	Wheat	extracellular	63.53	61.45
TraesCS5A01G498900.1	Wheat	extracellular	63.53	61.45
Solyc01g112000.2.1	Tomato	extracellular	59.77	60.92
TraesCS4D01G324000.1	Wheat	extracellular	62.41	60.81
Os10t0542400-01	Rice	extracellular	62.78	60.73
TraesCS4D01G323600.1	Wheat	extracellular	63.16	60.65
HORVU4Hr1G081990.2	Barley	extracellular	63.53	60.36
TraesCS5A01G499300.1	Wheat	nucleus	61.65	60.07
AT4G38400.1	Thale cress	extracellular	59.77	60.0
AT3G45970.1	Thale cress	extracellular	59.02	59.25
EER99370	Sorghum	extracellular	60.9	59.12
CDY69288	Canola	extracellular	58.65	59.09
Bra033563.1-P	Field mustard	extracellular	58.65	59.09
Zm00001d027520_P001	Maize	extracellular	61.65	58.99
KXG38992	Sorghum	extracellular	62.41	58.87
CDY61895	Canola	extracellular	59.4	58.74
Bra011899.1-P	Field mustard	extracellular	59.4	58.74
CDY72634	Canola	extracellular	58.27	58.49
CDY52801	Canola	extracellular	59.02	58.36
Zm00001d029783_P003	Maize	extracellular	60.15	58.18
CDY64278	Canola	extracellular	57.89	58.11
AT3G45960.2	Thale cress	extracellular	57.14	57.79
Zm00001d048344_P002	Maize	extracellular	59.4	57.66
Zm00001d006360_P001	Maize	extracellular	58.65	57.35
TraesCS4D01G323900.1	Wheat	golgi	58.27	57.2
Os07t0475400-01	Rice	extracellular	59.02	56.88
Os03t0132200-01	Rice	extracellular, plastid	59.4	56.63
TraesCS1B01G217200.1	Wheat	extracellular	58.27	56.36
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	63.16	56.19
TraesCS4B01G327100.1	Wheat	golgi	57.14	56.09
TraesCS5A01G499200.1	Wheat	extracellular	55.26	55.89
TraesCS5A01G499100.1	Wheat	extracellular	52.26	55.6
HORVU1Hr1G052290.4	Barley	extracellular	57.14	54.87
TraesCS1D01G206700.1	Wheat	extracellular	58.27	54.77
TraesCS1A01G203200.1	Wheat	extracellular	57.89	54.61
TraesCS4D01G323800.2	Wheat	extracellular	57.89	50.99
TraesCS7A01G545900.1	Wheat	extracellular	46.24	39.81
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	46.24	39.81
TraesCS7A01G545800.1	Wheat	extracellular	43.61	38.54
TraesCS7D01G532200.1	Wheat	extracellular	44.74	38.51
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	43.98	37.99
TraesCS7D01G532400.1	Wheat	extracellular	43.61	37.66
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	44.36	37.34
TraesCS7D01G532500.1	Wheat	extracellular	44.74	37.07
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	43.98	37.03
Os06t0725300-01	Rice	endoplasmic reticulum	43.23	36.74
GSMUA_AchrUn_...	Banana	extracellular	34.96	36.61
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	44.36	36.53
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	42.86	36.42
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	43.61	36.14
TraesCSU01G099100.1	Wheat	extracellular, golgi	42.11	35.9
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	42.86	35.74
GSMUA_Achr11P...	Banana	extracellular	33.83	35.43
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	42.11	35.11
GSMUA_AchrUn_...	Banana	extracellular	12.03	34.78
GSMUA_Achr2P13750_001	Banana	extracellular	31.58	32.18
GSMUA_Achr2P13740_001	Banana	extracellular	31.2	31.68
GSMUA_Achr2P13730_001	Banana	extracellular	31.2	31.68
GSMUA_AchrUn_...	Banana	extracellular	30.45	30.68
GSMUA_Achr7P07040_001	Banana	extracellular	31.2	29.54
GSMUA_Achr2P11930_001	Banana	extracellular	18.05	29.45
GSMUA_Achr4P26910_001	Banana	extracellular	28.2	27.57
KXG20919	Sorghum	plastid	44.36	26.64
GSMUA_AchrUn_...	Banana	extracellular	25.56	25.86
GSMUA_Achr1P00120_001	Banana	extracellular	25.19	25.19
GSMUA_Achr5P12080_001	Banana	extracellular	24.81	24.72
GSMUA_AchrUn_...	Banana	extracellular	16.54	24.44
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	28.57	23.82
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	43.23	17.86

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.2	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:GSMUA_Achr11G01300_001	EnsemblPlants:GSMUA_Achr11P01300_001	EnsemblPlants:GSMUA_Achr11T01300_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M0RNG0	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF4	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000295FDB4
SEG:seg	:	:	:	:	:

Description

Expansin-like A1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G01300_001]

Coordinates

chr11:+:873490..874874

Molecular Weight (calculated)

28371.7 Da

IEP (calculated)

8.075

GRAVY (calculated)

-0.041

Length

266 amino acids

Sequence
(BLAST)

001: MGGGSSDAFF AFLVFLAMSS AAACDRCVHQ SKAAYFSSSS ALSAGACGYG SMALGFDGGY VAAGSSAIHR GGVGCGACFQ IRCKNTSLCS TGGVKVILTD
101: LNKSNTTDFV LSGPAFAAMA RNGKAQELKK LGILDVEYKR IPCEYKNHNL SIRVEENSKS PNYLAIKFMY QGGQTDIVAV DVAQVGSTNW RFMSRDYGPV
201: WSTSRAPAGP LQLRVVVTGG YDGKWVWAPK PVLPAEWRTG SIYDMGVQIT DVAQEGCFPC DPQDWN

Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)

001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.