Factsheet for GSMUA_Achr5P19030_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular	77.65	77.07
GSMUA_Achr11P...	Banana	extracellular	73.86	73.58
GSMUA_Achr5P11590_001	Banana	extracellular	69.32	70.11
GSMUA_AchrUn_...	Banana	extracellular	46.21	64.89
KRH24119	Soybean	extracellular	64.02	64.75
KRH29091	Soybean	extracellular	62.88	64.09
VIT_03s0038g03430.t01	Wine grape	extracellular	62.5	63.71
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	71.21	61.24
EER95568	Sorghum	extracellular	61.74	60.37
TraesCS4B01G326900.1	Wheat	extracellular	62.88	60.36
PGSC0003DMT400047948	Potato	extracellular	59.09	60.0
TraesCS5A01G498900.1	Wheat	extracellular	62.5	60.0
HORVU4Hr1G081990.2	Barley	extracellular	63.26	59.64
TraesCS4D01G323600.1	Wheat	extracellular	62.5	59.57
Os10t0542400-01	Rice	extracellular	61.74	59.27
Zm00001d029783_P003	Maize	extracellular	61.74	59.27
Solyc01g112000.2.1	Tomato	extracellular	58.33	59.0
TraesCS4B01G327200.1	Wheat	extracellular	59.85	58.96
Zm00001d027520_P001	Maize	extracellular	61.74	58.63
AT3G45970.1	Thale cress	extracellular	58.71	58.49
Zm00001d048344_P002	Maize	extracellular	60.61	58.39
Bra011899.1-P	Field mustard	extracellular	59.47	58.36
CDY61895	Canola	extracellular	59.47	58.36
TraesCS4D01G324000.1	Wheat	extracellular	60.23	58.24
KXG38992	Sorghum	extracellular	62.12	58.16
CDY52801	Canola	extracellular	59.09	57.99
AT4G38400.1	Thale cress	extracellular	57.95	57.74
TraesCS5A01G499300.1	Wheat	nucleus	59.47	57.51
AT3G45960.2	Thale cress	extracellular	57.2	57.41
EER99370	Sorghum	extracellular	59.09	56.93
Bra033563.1-P	Field mustard	extracellular	56.82	56.82
CDY69288	Canola	extracellular	56.82	56.82
Os07t0475400-01	Rice	extracellular	58.71	56.16
TraesCS1B01G217200.1	Wheat	extracellular	58.33	56.0
Os03t0132200-01	Rice	extracellular, plastid	59.09	55.91
CDY64278	Canola	extracellular	56.06	55.85
CDY72634	Canola	extracellular	56.06	55.85
Zm00001d006360_P001	Maize	extracellular	57.2	55.51
TraesCS4B01G327100.1	Wheat	golgi	56.44	54.98
TraesCS5A01G499100.1	Wheat	extracellular	51.89	54.8
TraesCS4D01G323900.1	Wheat	golgi	56.06	54.61
HORVU1Hr1G052290.4	Barley	extracellular	56.82	54.15
TraesCS1A01G203200.1	Wheat	extracellular	57.58	53.9
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	60.98	53.85
TraesCS1D01G206700.1	Wheat	extracellular	57.58	53.71
TraesCS5A01G499200.1	Wheat	extracellular	52.65	52.85
TraesCS4D01G323800.2	Wheat	extracellular	56.44	49.34
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	44.32	37.86
TraesCS7A01G545900.1	Wheat	extracellular	43.56	37.22
TraesCS7D01G532200.1	Wheat	extracellular	42.05	35.92
TraesCS7A01G545800.1	Wheat	extracellular	40.91	35.88
Os06t0725300-01	Rice	endoplasmic reticulum	41.67	35.14
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	41.67	35.14
TraesCS7D01G532400.1	Wheat	extracellular	40.53	34.74
GSMUA_AchrUn_...	Banana	extracellular	33.33	34.65
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	41.29	34.49
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	40.15	34.42
GSMUA_Achr11P...	Banana	extracellular	32.95	34.25
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	40.91	34.18
TraesCS7D01G532500.1	Wheat	extracellular	41.29	33.96
TraesCSU01G099100.1	Wheat	extracellular, golgi	39.77	33.65
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	40.91	33.44
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	40.53	33.33
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	39.77	32.92
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	39.39	32.6
GSMUA_AchrUn_...	Banana	extracellular	10.61	30.43
GSMUA_Achr2P13740_001	Banana	extracellular	29.92	30.15
GSMUA_Achr2P13750_001	Banana	extracellular	29.55	29.89
GSMUA_Achr2P11930_001	Banana	extracellular	18.18	29.45
GSMUA_Achr2P13730_001	Banana	extracellular	28.79	29.01
GSMUA_AchrUn_...	Banana	extracellular	28.79	28.79
GSMUA_Achr7P07040_001	Banana	extracellular	28.79	27.05
GSMUA_Achr4P26910_001	Banana	extracellular	26.89	26.1
GSMUA_AchrUn_...	Banana	extracellular	25.0	25.1
KXG20919	Sorghum	plastid	41.67	24.83
GSMUA_Achr1P00120_001	Banana	extracellular	24.62	24.44
GSMUA_Achr5P12080_001	Banana	extracellular	23.86	23.6
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	27.27	22.57
GSMUA_AchrUn_...	Banana	extracellular	15.15	22.22
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	41.67	17.08

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.2	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:GSMUA_Achr5G19030_001	EnsemblPlants:GSMUA_Achr5P19030_001	EnsemblPlants:GSMUA_Achr5T19030_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M0SZT2	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF4	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002959D00

Description

Expansin-like A2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19030_001]

Coordinates

chr5:+:20539097..20540501

Molecular Weight (calculated)

28892.7 Da

IEP (calculated)

8.965

GRAVY (calculated)

-0.100

Length

264 amino acids

Sequence
(BLAST)

001: MGGGTVLAFF VLSLSILSAT ACDRCVHHSK AAYSPSASAL SVGACGYGSM ALSFNGGYIA AGSSALHREG FGCGACFQVR CKNRRLCSTG GVRVILTDLN
101: KSNTTDLVLS PRAFTAMARD GTAQELKRLG ILDVEYKRIP CEYKKQNLSI RVEESSRRPD RLVIKFLYQG GQTDIVAVDV AQVGSWNWRF MSREYGPVWS
201: TRRAPAGALQ FRMVVTGGYD GKWVWAEKAV LPAEWKTGSI YELGVQLTDI AQEGCYPCDT REWK

Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)

001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.