Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006360_P001 Maize extracellular 92.34 93.01
Os07t0475400-01 Rice extracellular 75.91 75.36
GSMUA_Achr11P... Banana extracellular 59.12 60.9
GSMUA_Achr5P19030_001 Banana extracellular 56.93 59.09
EER95568 Sorghum extracellular 56.2 57.04
GSMUA_Achr5P11590_001 Banana extracellular 54.01 56.7
GSMUA_Achr11P... Banana extracellular 54.01 55.85
KXG38992 Sorghum extracellular 56.57 54.96
KRH24119 Soybean extracellular 50.73 53.26
KRH29091 Soybean extracellular 49.63 52.51
VIT_03s0038g03430.t01 Wine grape extracellular 48.54 51.35
Solyc01g112000.2.1 Tomato extracellular 47.45 49.81
PGSC0003DMT400047948 Potato extracellular 47.08 49.62
GSMUA_AchrUn_... Banana extracellular 33.21 48.4
GSMUA_Achr1P02170_001 Banana extracellular, peroxisome, plastid 54.01 48.21
CDY69288 Canola extracellular 46.35 48.11
Bra033563.1-P Field mustard extracellular 46.35 48.11
CDY72634 Canola extracellular 45.62 47.17
CDY64278 Canola extracellular 45.62 47.17
AT4G38400.1 Thale cress extracellular 45.26 46.79
AT3G45970.1 Thale cress extracellular 44.89 46.42
AT3G45960.2 Thale cress extracellular 44.53 46.39
Bra011899.1-P Field mustard extracellular 45.26 46.1
CDY61895 Canola extracellular 45.26 46.1
CDY52801 Canola extracellular 44.89 45.72
EES07509 Sorghum extracellular 29.2 30.3
EER88254 Sorghum extracellular 28.47 30.12
KXG19818 Sorghum extracellular 28.47 30.12
EES11234 Sorghum extracellular 28.83 30.04
KXG20919 Sorghum plastid 45.99 28.44
OQU93456 Sorghum cytosol, extracellular 21.17 27.36
EES07508 Sorghum extracellular 29.2 27.21
EES05780 Sorghum extracellular 29.2 27.12
EES05488 Sorghum extracellular 27.01 27.11
EES11235 Sorghum extracellular 28.47 26.8
EES11233 Sorghum extracellular 27.37 26.04
EER91948 Sorghum extracellular 25.91 25.54
EER91947 Sorghum extracellular 24.45 24.91
OQU89980 Sorghum extracellular, plasma membrane, vacuole 20.44 24.89
KXG38972 Sorghum extracellular 23.72 24.44
EER94537 Sorghum extracellular 23.72 24.44
OQU93455 Sorghum extracellular 22.63 24.22
EER91942 Sorghum extracellular 23.36 24.06
KXG38969 Sorghum extracellular 23.36 24.06
KXG40417 Sorghum mitochondrion 25.91 23.91
EER94500 Sorghum extracellular 25.18 23.79
EER95684 Sorghum extracellular 22.99 23.68
OQU93459 Sorghum extracellular 22.99 23.68
EER93754 Sorghum extracellular 26.28 23.53
EER95683 Sorghum extracellular 22.63 23.31
OQU93457 Sorghum extracellular 22.63 23.31
OQU93458 Sorghum extracellular 22.63 23.31
EER91945 Sorghum extracellular 23.36 23.19
EER98447 Sorghum extracellular 25.91 23.13
EER98449 Sorghum extracellular 26.28 23.08
KXG37946 Sorghum extracellular 27.01 22.77
KXG40416 Sorghum extracellular, vacuole 25.91 22.19
OQU92157 Sorghum extracellular 24.82 22.08
EER91949 Sorghum extracellular 21.9 21.28
EER94506 Sorghum extracellular 21.9 21.28
EES05315 Sorghum extracellular 24.09 20.75
OQU92156 Sorghum plastid 24.45 20.62
KXG38933 Sorghum mitochondrion 22.99 19.75
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.2EntrezGene:8077278UniProt:C5X8H6EnsemblPlants:EER99370
ProteinID:EER99370ProteinID:EER99370.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0005575GO:GO:0005576InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908
PFAM:PF01357PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF16
InterPro:RlpA-like_sfEnsemblPlantsGene:SORBI_3002G300000SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMUniParc:UPI0001A83F6F
RefSeq:XP_002462849.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:67618522..67621266
Molecular Weight (calculated)
29261.1 Da
IEP (calculated)
8.418
GRAVY (calculated)
-0.095
Length
274 amino acids
Sequence
(BLAST)
001: MDVLLCCCLL LLLASAASAG SERCVRQGKA AYSPSSLSPV PHGSSGACGY GAMAAEINGG FLAAGGPRQH RGGLGCGRCF QMRCRDAKLC SAGGVRVVLT
101: DFHRSNRTDF LLAGPAFAVL AKPGMAQQLN RLDALSVEYK RIPCEYKEKN LSIRVEEGSD KNRGNLVVKL LYQGGQTDIL AVDVAPVGSS AEWRFMTRVY
201: GPVWSTPRAP AGPLQFRAVV TGGYDGKWVW AEQEVLPADW RPGQVYDTGV RIADVARDGC RGCAAADAAM DDWK
Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)
001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
Arabidopsis Description
EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.