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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017377_P001 Maize extracellular 91.94 93.66
Os02t0639500-01 Rice extracellular 82.05 85.82
TraesCS6D01G218500.1 Wheat extracellular 83.15 84.7
TraesCS6A01G235800.1 Wheat extracellular 82.05 83.9
TraesCS6B01G264400.1 Wheat extracellular 82.05 83.58
HORVU6Hr1G060410.7 Barley extracellular 80.95 82.46
GSMUA_AchrUn_... Banana extracellular 69.23 71.86
VIT_12s0059g00190.t01 Wine grape extracellular 66.67 70.27
GSMUA_Achr1P00120_001 Banana extracellular 66.3 68.05
KRH26935 Soybean extracellular 64.47 67.43
GSMUA_Achr5P12080_001 Banana extracellular 65.93 67.42
Solyc07g054170.2.1 Tomato extracellular 64.47 65.92
PGSC0003DMT400047177 Potato extracellular 64.47 65.92
Bra024215.1-P Field mustard extracellular 63.74 65.66
Bra026272.1-P Field mustard extracellular 63.74 65.66
CDY58728 Canola extracellular 63.74 65.66
CDY70556 Canola extracellular 63.74 65.66
AT4G28250.1 Thale cress extracellular 63.37 65.53
CDY18990 Canola extracellular 63.37 65.28
CDY05789 Canola extracellular 61.17 63.02
CDY31940 Canola extracellular 60.81 62.64
Bra036499.1-P Field mustard extracellular 60.81 62.64
Solyc10g008440.2.1 Tomato extracellular 59.71 62.21
KRH22402 Soybean extracellular 58.61 62.02
AT2G20750.1 Thale cress extracellular 61.17 61.62
PGSC0003DMT400055827 Potato extracellular 58.97 61.45
KRH55988 Soybean extracellular 60.07 61.42
KRH25552 Soybean extracellular 60.07 61.42
EES07509 Sorghum extracellular 42.49 43.94
KXG19818 Sorghum extracellular 38.46 40.54
EER88254 Sorghum extracellular 38.46 40.54
EER91942 Sorghum extracellular 39.19 40.23
EES11234 Sorghum extracellular 38.1 39.54
EES07508 Sorghum extracellular 41.76 38.78
EES05780 Sorghum extracellular 41.39 38.31
EER91947 Sorghum extracellular 37.36 37.92
EES11233 Sorghum extracellular 39.93 37.85
EES11235 Sorghum extracellular 39.19 36.77
OQU93456 Sorghum cytosol, extracellular 28.21 36.32
KXG38969 Sorghum extracellular 35.16 36.09
EER94537 Sorghum extracellular 34.8 35.71
KXG38972 Sorghum extracellular 34.8 35.71
EER94500 Sorghum extracellular 37.36 35.17
EER91945 Sorghum extracellular 35.53 35.14
KXG40417 Sorghum mitochondrion 37.73 34.68
OQU92157 Sorghum extracellular 38.83 34.42
OQU93455 Sorghum extracellular 31.87 33.98
EER98449 Sorghum extracellular 38.83 33.97
EER98447 Sorghum extracellular 37.73 33.55
EER91948 Sorghum extracellular 33.7 33.09
OQU93457 Sorghum extracellular 32.23 33.08
OQU93458 Sorghum extracellular 32.23 33.08
OQU93459 Sorghum extracellular 32.23 33.08
EER95683 Sorghum extracellular 32.23 33.08
EES05315 Sorghum extracellular 38.46 33.02
EER91949 Sorghum extracellular 34.07 32.98
EER94506 Sorghum extracellular 34.07 32.98
KXG38933 Sorghum mitochondrion 38.46 32.92
EER95684 Sorghum extracellular 31.87 32.71
OQU92156 Sorghum plastid 38.46 32.31
EER93754 Sorghum extracellular 34.8 31.05
KXG40416 Sorghum extracellular, vacuole 36.26 30.94
KXG37946 Sorghum extracellular 35.16 29.54
EER99370 Sorghum extracellular 27.11 27.01
KXG38992 Sorghum extracellular 24.54 23.76
OQU89980 Sorghum extracellular, plasma membrane, vacuole 19.41 23.56
EER95568 Sorghum extracellular 22.71 22.96
KXG20919 Sorghum plastid 24.54 15.12
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.3EntrezGene:8074807UniProt:C5XY99EnsemblPlants:EES05488
ProteinID:EES05488ProteinID:EES05488.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0006949GO:GO:0008150GO:GO:0009506
GO:GO:0009653GO:GO:0009987GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749
InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330PRINTS:PR00829PRINTS:PR01225
PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF48InterPro:RlpA-like_DPBBInterPro:RlpA-like_sf
SMART:SM00837EnsemblPlantsGene:SORBI_3004G227900SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A8559ARefSeq:XP_002452512.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:+:57748597..57753412
Molecular Weight (calculated)
28583.7 Da
IEP (calculated)
7.954
GRAVY (calculated)
0.010
Length
273 amino acids
Sequence
(BLAST)
001: MAAGASSSSH AYGFSISAVL LASSFVCLFG SGEASGAAHR VVDPEWHPAT ATWYGSAEGD GSDGGACGYG TLVDVVPMKA RVGAVSPVLF KSGEGCGACY
101: KVRCLDHGIC SRRAVTVIVT DECPGGVCSG GRTHFDLSGA AFGRLAVAGA GGQLRNRGEI NVVFRRTACR YGGKNIAFHV NEGSTSFWLS LLVEFEDGDG
201: DIGSMQLKQA NSAQWRDMQH VWGATYSLTP GPLVGPFSVR LTTLSSKQTL TAQDVIPKNW APKATYTSRL NFA
Best Arabidopsis Sequence Match ( AT4G28250.1 )
(BLAST)
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Arabidopsis Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.