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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG19818 Sorghum extracellular 98.46 98.46
Zm00001d045861_P001 Maize mitochondrion 84.17 82.26
Zm00001d045792_P001 Maize extracellular 84.17 80.74
EES07509 Sorghum extracellular 73.36 71.97
HORVU0Hr1G016380.2 Barley extracellular 72.2 70.57
TraesCS6A01G249700.1 Wheat extracellular 72.2 70.3
TraesCS6D01G231400.1 Wheat extracellular 72.2 70.3
TraesCS6A01G249400.2 Wheat extracellular 71.43 69.81
TraesCS2D01G078900.1 Wheat extracellular 66.02 67.32
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 61.0 66.67
TraesCS2A01G081200.1 Wheat extracellular 65.25 66.54
TraesCS2B01G095600.1 Wheat extracellular 65.25 66.27
Os02t0658600-00 Rice plastid 69.5 65.93
HORVU2Hr1G013360.1 Barley extracellular 63.71 65.74
EES11234 Sorghum extracellular 66.02 65.02
TraesCS2A01G080800.1 Wheat extracellular 63.71 64.96
TraesCS2B01G607400.1 Wheat extracellular 61.78 64.26
TraesCS2A01G580200.1 Wheat extracellular 62.16 64.14
TraesCS2A01G580300.1 Wheat extracellular 61.39 63.86
TraesCS2D01G592900.1 Wheat extracellular 61.39 63.86
TraesCSU01G009600.1 Wheat extracellular 61.39 62.85
TraesCS2D01G078800.1 Wheat extracellular 60.62 61.81
TraesCS2B01G095700.1 Wheat extracellular 59.46 61.11
TraesCS2D01G078600.1 Wheat extracellular 55.6 60.25
TraesCS2D01G104800.1 Wheat extracellular 58.3 59.45
TraesCS2A01G105200.1 Wheat extracellular 57.92 59.06
TraesCS2B01G122100.1 Wheat extracellular 43.24 58.64
GSMUA_AchrUn_... Banana extracellular 57.92 56.82
VIT_15s0021g02670.t01 Wine grape extracellular 59.46 56.41
VIT_15s0021g02700.t01 Wine grape extracellular 59.07 56.04
Solyc01g090810.2.1 Tomato extracellular 58.3 54.91
GSMUA_Achr4P26910_001 Banana extracellular 56.37 53.68
CDY18950 Canola cytosol, extracellular, plastid 48.65 53.16
CDY72345 Canola cytosol 49.81 52.87
CDY18951 Canola extracellular 55.6 52.36
PGSC0003DMT400048506 Potato plastid 39.0 52.06
HORVU2Hr1G013340.1 Barley extracellular 58.69 52.05
CDY18948 Canola extracellular 39.0 51.79
AT1G65680.1 Thale cress extracellular 54.05 51.28
CDX74711 Canola extracellular 51.35 50.96
KRH33426 Soybean extracellular 53.28 50.74
CDX74710 Canola extracellular 53.67 50.73
CDY70406 Canola extracellular 53.67 50.73
Bra004889.1-P Field mustard extracellular 53.67 50.55
KRG88934 Soybean extracellular, vacuole 54.05 50.54
KRH75302 Soybean extracellular 54.05 50.54
EES11235 Sorghum extracellular 56.37 50.17
EES05780 Sorghum extracellular 57.14 50.17
EES07508 Sorghum extracellular 56.76 50.0
KRH33423 Soybean extracellular 53.28 49.82
KRH65410 Soybean extracellular 51.35 49.81
AT2G45110.1 Thale cress extracellular 49.81 49.81
EER93754 Sorghum extracellular 58.69 49.67
CDY18946 Canola extracellular 50.97 49.62
AT1G65681.1 Thale cress cytosol 42.08 48.88
VIT_09s0002g08510.t01 Wine grape extracellular 52.51 48.75
Bra000370.1-P Field mustard extracellular 48.65 48.65
CDX83404 Canola extracellular 48.65 48.65
EES11233 Sorghum extracellular 54.05 48.61
CDY72505 Canola cytosol 29.34 47.5
CDY72655 Canola cytosol, plastid 30.89 47.34
Bra035987.1-P Field mustard extracellular 48.26 47.17
CDX96901 Canola extracellular 48.26 47.17
CDY14888 Canola extracellular 48.26 47.17
Solyc10g018500.1.1 Tomato extracellular 48.26 47.17
Solyc01g090820.1.1 Tomato extracellular 46.33 46.69
EER91942 Sorghum extracellular 47.49 46.24
KXG37946 Sorghum extracellular 57.92 46.15
Solyc03g093390.2.1 Tomato extracellular, nucleus 49.42 44.91
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 22.39 44.62
EER91947 Sorghum extracellular 45.95 44.24
EER98447 Sorghum extracellular 51.74 43.65
Bra004890.1-P Field mustard extracellular 52.9 43.08
EER98449 Sorghum extracellular 51.74 42.95
Solyc07g049540.1.1 Tomato extracellular 42.47 42.8
CDX95627 Canola extracellular 45.95 42.65
KXG38969 Sorghum extracellular 43.63 42.48
AT3G60570.1 Thale cress extracellular 43.24 42.42
EER94537 Sorghum extracellular 43.24 42.11
KXG38972 Sorghum extracellular 43.24 42.11
Solyc05g052330.1.1 Tomato extracellular 43.24 41.79
OQU93456 Sorghum cytosol, extracellular 33.98 41.51
EER91945 Sorghum extracellular 44.02 41.3
PGSC0003DMT400095086 Potato plastid 39.77 41.2
EER91949 Sorghum extracellular 44.79 41.13
EER94506 Sorghum extracellular 44.79 41.13
EER91948 Sorghum extracellular 43.63 40.65
KXG40417 Sorghum mitochondrion 46.33 40.4
CDX74713 Canola extracellular 52.9 39.94
CDY71186 Canola extracellular 41.7 39.85
Bra003421.1-P Field mustard extracellular 40.93 39.85
CDX67835 Canola extracellular 40.93 39.85
OQU92157 Sorghum extracellular 47.1 39.61
Bra004891.1-P Field mustard cytosol, nucleus, plastid 20.85 39.13
OQU93455 Sorghum extracellular 38.61 39.06
EER94500 Sorghum extracellular 43.63 38.97
OQU93459 Sorghum extracellular 39.77 38.72
EES05488 Sorghum extracellular 40.54 38.46
KXG40416 Sorghum extracellular, vacuole 47.49 38.44
EER95684 Sorghum extracellular 39.38 38.35
EER95683 Sorghum extracellular 39.0 37.97
OQU93457 Sorghum extracellular 39.0 37.97
OQU93458 Sorghum extracellular 39.0 37.97
KXG38933 Sorghum mitochondrion 45.95 37.3
OQU92156 Sorghum plastid 46.72 37.23
EES05315 Sorghum extracellular 44.4 36.16
CDY48362 Canola extracellular 46.72 33.89
Bra014484.1-P Field mustard extracellular 47.1 33.89
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 51.74 29.19
EER99370 Sorghum extracellular 30.12 28.47
EER95568 Sorghum extracellular 29.34 28.15
KXG38992 Sorghum extracellular 27.03 24.82
OQU89980 Sorghum extracellular, plasma membrane, vacuole 19.3 22.22
KXG20919 Sorghum plastid 26.25 15.35
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EntrezGene:8076405UniProt:C5Z8Y1EnsemblPlants:EER88254
ProteinID:EER88254ProteinID:EER88254.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112
InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PFscan:PS51257PANTHER:PTHR31692
PANTHER:PTHR31692:SF27InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837EnsemblPlantsGene:SORBI_3010G120100SUPFAM:SSF49590
SUPFAM:SSF50685SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A895B1RefSeq:XP_002436887.1:
Description
hypothetical protein
Coordinates
chr10:+:13680107..13681549
Molecular Weight (calculated)
26904.6 Da
IEP (calculated)
7.528
GRAVY (calculated)
-0.029
Length
259 amino acids
Sequence
(BLAST)
001: MACKQQIGVV VVLSCFIAIS ALAFRPCAAW SDAGATWYGP ANGAGSDGGA CGYQGAVHQP PFSSMITAGS NSIYQDGKGC GTCYQVKCTG HQSCSGSPVT
101: VVLTDQCPGA CQSEPVHFDL SGTAFGAMAK PGQADQLRNV GRLPVQYTRV PCNWNGVDVA FRVDAGSNAN YLAMAIEYEA GDGDLRAVEL QNGAAAWAPM
201: ERSWGAVWRY QSSGSSLQAA PLSVRLTSGS GKTLVASGVI PAGWQPGNTY RCVVNFGRN
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.