Factsheet for TraesCS2D01G078600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G078900.1	Wheat	extracellular	84.52	79.53
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	78.24	78.9
TraesCS2D01G592900.1	Wheat	extracellular	72.8	69.88
TraesCS2D01G104800.1	Wheat	extracellular	74.06	69.69
TraesCS2D01G078800.1	Wheat	extracellular	72.8	68.5
Os02t0658600-00	Rice	plastid	66.11	57.88
Zm00001d045861_P001	Maize	mitochondrion	63.6	57.36
Zm00001d017493_P001	Maize	extracellular	64.02	57.3
KXG19818	Sorghum	extracellular	61.09	56.37
Zm00001d045792_P001	Maize	extracellular	63.6	56.3
EES07509	Sorghum	extracellular	61.51	55.68
EER88254	Sorghum	extracellular	60.25	55.6
TraesCS6D01G231400.1	Wheat	extracellular	61.09	54.89
TraesCS2D01G411000.1	Wheat	extracellular	58.16	53.05
CDY72505	Canola	cytosol	34.31	51.25
GSMUA_AchrUn_...	Banana	extracellular	56.49	51.14
VIT_15s0021g02670.t01	Wine grape	extracellular	58.16	50.92
Zm00001d051368_P001	Maize	extracellular	33.05	50.0
CDY72655	Canola	cytosol, plastid	35.15	49.7
CDY18950	Canola	cytosol, extracellular, plastid	48.54	48.95
TraesCS2D01G411200.1	Wheat	extracellular	53.14	48.66
VIT_15s0021g02700.t01	Wine grape	extracellular	55.23	48.35
CDY72345	Canola	cytosol	48.95	47.95
PGSC0003DMT400048506	Potato	plastid	38.91	47.94
Bra035987.1-P	Field mustard	extracellular	53.14	47.92
CDY14888	Canola	extracellular	53.14	47.92
Solyc01g090810.2.1	Tomato	extracellular	54.39	47.27
CDX96901	Canola	extracellular	52.3	47.17
TraesCS2D01G411100.1	Wheat	extracellular, plastid	55.23	46.98
Bra000370.1-P	Field mustard	extracellular	50.63	46.72
CDX83404	Canola	extracellular	50.63	46.72
GSMUA_Achr4P26910_001	Banana	extracellular	53.14	46.69
KRH33426	Soybean	extracellular	53.14	46.69
CDX74711	Canola	extracellular	50.63	46.36
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	25.1	46.15
AT1G65681.1	Thale cress	cytosol	42.68	45.74
AT2G45110.1	Thale cress	extracellular	49.37	45.56
TraesCS6D01G037600.1	Wheat	mitochondrion	21.76	44.83
CDY18946	Canola	extracellular	49.79	44.74
TraesCS6D01G231200.1	Wheat	extracellular	53.56	44.6
Solyc10g018500.1.1	Tomato	extracellular	49.37	44.53
VIT_09s0002g08510.t01	Wine grape	extracellular	51.88	44.44
KRG88934	Soybean	extracellular, vacuole	51.46	44.4
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	25.52	44.2
KRH75302	Soybean	extracellular	51.05	44.04
Solyc01g090820.1.1	Tomato	extracellular	47.28	43.97
KRH65410	Soybean	extracellular	48.95	43.82
KRH33423	Soybean	extracellular	50.21	43.32
TraesCS6D01G231300.1	Wheat	extracellular	51.88	42.91
TraesCS5D01G384200.1	Wheat	extracellular	55.23	42.86
TraesCS3D01G482800.1	Wheat	extracellular	50.63	42.01
Solyc03g093390.2.1	Tomato	extracellular, nucleus	49.79	41.75
CDY18948	Canola	extracellular	33.89	41.54
AT1G65680.1	Thale cress	extracellular	47.28	41.39
TraesCS1D01G215400.1	Wheat	extracellular	45.61	41.29
CDY70406	Canola	extracellular	47.28	41.24
Solyc05g052330.1.1	Tomato	extracellular	46.03	41.04
CDX74710	Canola	extracellular	46.86	40.88
Bra004889.1-P	Field mustard	extracellular	46.86	40.73
CDY18951	Canola	extracellular	46.03	40.0
TraesCS1D01G211500.1	Wheat	extracellular	44.35	40.0
TraesCS3D01G000500.1	Wheat	extracellular	45.19	39.42
AT3G60570.1	Thale cress	extracellular	43.51	39.39
CDX95627	Canola	extracellular	45.61	39.07
TraesCS1D01G215300.1	Wheat	extracellular	44.77	39.05
Solyc07g049540.1.1	Tomato	extracellular	41.0	38.13
TraesCS6D01G037700.1	Wheat	extracellular	43.51	38.1
TraesCS3D01G000400.1	Wheat	cytosol	32.22	37.93
CDY71186	Canola	extracellular	42.68	37.64
Bra003421.1-P	Field mustard	extracellular	41.84	37.59
CDX67835	Canola	extracellular	41.84	37.59
TraesCS6D01G037500.1	Wheat	extracellular	42.68	37.36
TraesCS3D01G476700.1	Wheat	extracellular	47.28	36.81
PGSC0003DMT400095086	Potato	plastid	38.49	36.8
TraesCS6D01G198400.1	Wheat	extracellular	46.03	36.79
TraesCS3D01G476800.1	Wheat	extracellular	28.87	35.57
TraesCS2D01G459300.1	Wheat	extracellular	39.33	35.47
TraesCS3D01G474800.1	Wheat	extracellular	46.44	35.35
TraesCS2D01G369200.2	Wheat	extracellular	41.0	35.13
TraesCS6D01G218500.1	Wheat	extracellular	39.33	35.07
TraesCS4D01G361900.1	Wheat	extracellular	43.51	35.02
TraesCS1D01G215100.1	Wheat	plastid	41.0	34.63
TraesCS4D01G361700.1	Wheat	extracellular	44.35	33.54
TraesCS1D01G215500.1	Wheat	extracellular	43.51	33.02
Bra004890.1-P	Field mustard	extracellular	43.1	32.39
TraesCS4D01G355100.1	Wheat	extracellular	36.4	32.22
TraesCS4D01G355800.1	Wheat	extracellular	36.4	32.22
TraesCS4D01G355700.1	Wheat	extracellular	35.98	32.09
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	46.03	31.7
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	41.42	31.53
CDX74713	Canola	extracellular	43.51	30.32
CDY48362	Canola	extracellular	42.26	28.29
Bra014484.1-P	Field mustard	extracellular	42.26	28.06
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	46.44	24.18
TraesCS4D01G323600.1	Wheat	extracellular	27.62	23.83
TraesCS4D01G324000.1	Wheat	extracellular	27.2	23.81
TraesCS4D01G323900.1	Wheat	golgi	25.94	22.88
TraesCS4D01G323800.2	Wheat	extracellular	26.78	21.19
TraesCS1D01G206700.1	Wheat	extracellular	23.85	20.14
TraesCS7D01G532500.1	Wheat	extracellular	24.69	18.38
TraesCS7D01G532200.1	Wheat	extracellular	22.18	17.15
TraesCS7D01G532400.1	Wheat	extracellular	21.76	16.88

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	PFAM:PF01357	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF27	InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2D01G078600
EnsemblPlants:TraesCS2D01G078600.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:33726795..33728195

Molecular Weight (calculated)

24921.3 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.037

Length

239 amino acids

Sequence
(BLAST)

001: MVSSSFVTFV ALATSCLLIL HSRSVSGWSD GGATWYGPRD GAGSDGGACG YQGDVEQPPF SAMITAGGSS IFNGGKGCGA CYQCPGGPCE AEAAHFDLSG
101: KAFGAMALPG QAENLRTVGN LRMQYNRVPC KWGGLDIAFK VDAGSNPSYL AVLIEDEAGD GDLSGVELQE SGGSWAPMQE SWGATWEYNS GSTLHAPISI
201: RLISGSGNKL VATNVIPSGW QAGKTYRSIV NFQLLLIRY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.