Factsheet for Bra004891.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
golgi 1
nucleus 1
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18946	Canola	extracellular	81.88	42.48
AT1G65681.1	Thale cress	cytosol	58.7	36.32
Bra000370.1-P	Field mustard	extracellular	67.39	35.91
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	31.16	33.08
AT2G45110.1	Thale cress	extracellular	60.87	32.43
Bra035987.1-P	Field mustard	extracellular	59.42	30.94
TraesCS2B01G122100.1	Wheat	extracellular	39.13	28.27
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	44.93	26.16
TraesCS2D01G078600.1	Wheat	extracellular	44.2	25.52
HORVU2Hr1G013360.1	Barley	extracellular	45.65	25.1
TraesCS2A01G081200.1	Wheat	extracellular	45.65	24.8
TraesCS2B01G095600.1	Wheat	extracellular	45.65	24.71
Bra003421.1-P	Field mustard	extracellular	47.1	24.44
TraesCS2D01G078900.1	Wheat	extracellular	44.93	24.41
TraesCS2A01G080800.1	Wheat	extracellular	43.48	23.62
Zm00001d017493_P001	Maize	extracellular	45.65	23.6
TraesCSU01G009600.1	Wheat	extracellular	42.75	23.32
TraesCS2D01G104800.1	Wheat	extracellular	42.75	23.23
HORVU0Hr1G016380.2	Barley	extracellular	44.2	23.02
TraesCS6D01G231400.1	Wheat	extracellular	44.2	22.93
TraesCS2D01G592900.1	Wheat	extracellular	41.3	22.89
TraesCS2B01G607400.1	Wheat	extracellular	41.3	22.89
TraesCS2A01G105200.1	Wheat	extracellular	42.03	22.83
TraesCS2D01G078800.1	Wheat	extracellular	42.03	22.83
TraesCS2A01G580200.1	Wheat	extracellular	41.3	22.71
TraesCS6A01G249700.1	Wheat	extracellular	43.48	22.56
TraesCS2A01G580300.1	Wheat	extracellular	40.58	22.49
EES07509	Sorghum	extracellular	42.75	22.35
Os02t0658600-00	Rice	plastid	44.2	22.34
TraesCS6A01G249400.2	Wheat	extracellular	42.75	22.26
Os04t0552000-00	Rice	extracellular	42.03	21.97
Solyc10g018500.1.1	Tomato	extracellular	42.03	21.89
Zm00001d045861_P001	Maize	mitochondrion	42.03	21.89
TraesCS2B01G095700.1	Wheat	extracellular	39.86	21.83
GSMUA_Achr2P13740_001	Banana	extracellular	41.3	21.76
Zm00001d045792_P001	Maize	extracellular	42.03	21.48
GSMUA_Achr2P13750_001	Banana	extracellular	40.58	21.46
KXG19818	Sorghum	extracellular	39.86	21.24
GSMUA_Achr2P13730_001	Banana	extracellular	39.86	20.99
Zm00001d026170_P001	Maize	extracellular	39.86	20.99
EER88254	Sorghum	extracellular	39.13	20.85
Os05t0246300-01	Rice	extracellular	39.86	20.83
TraesCS2A01G413600.1	Wheat	extracellular	39.13	20.61
TraesCS2B01G432300.1	Wheat	plastid	39.13	20.61
EES11234	Sorghum	extracellular	39.13	20.53
Solyc07g049540.1.1	Tomato	extracellular	37.68	20.23
TraesCS2D01G411000.1	Wheat	extracellular	38.41	20.23
Solyc01g090820.1.1	Tomato	extracellular	36.96	19.84
PGSC0003DMT400095086	Potato	plastid	35.51	19.6
Bra026272.1-P	Field mustard	extracellular	36.96	19.25
HORVU2Hr1G097480.1	Barley	extracellular	39.13	19.08
Bra004889.1-P	Field mustard	extracellular	37.68	18.91
HORVU2Hr1G013340.1	Barley	extracellular	39.86	18.84
Bra036499.1-P	Field mustard	extracellular	35.51	18.49
Solyc05g052330.1.1	Tomato	extracellular	35.51	18.28
TraesCS5D01G384200.1	Wheat	extracellular	39.86	17.86
TraesCS5B01G376500.1	Wheat	extracellular	39.86	17.8
Bra024215.1-P	Field mustard	extracellular	34.06	17.74
KXG37946	Sorghum	extracellular	38.41	16.31
Os03t0645000-00	Rice	mitochondrion	36.96	16.29
EER93754	Sorghum	extracellular	35.51	16.01
Bra004890.1-P	Field mustard	extracellular	34.78	15.09
Bra014484.1-P	Field mustard	extracellular	38.41	14.72
HORVU5Hr1G092910.9	Barley	plastid	39.86	13.29
Bra040107.1-P	Field mustard	extracellular	23.19	12.8
Bra012684.1-P	Field mustard	extracellular	23.19	12.8
Bra012687.1-P	Field mustard	extracellular	23.19	12.8
GSMUA_AchrUn_...	Banana	extracellular	15.22	11.67
Bra011899.1-P	Field mustard	extracellular	22.46	11.52
Bra033563.1-P	Field mustard	extracellular	21.74	11.36
Zm00001d033231_P003	Maize	extracellular	34.78	6.72
Zm00001d051368_P001	Maize	extracellular	4.35	3.8

Protein Annotations

Gene3D:2.60.40.760	MapMan:35.1	EnsemblPlantsGene:Bra004891	EnsemblPlants:Bra004891.1	EnsemblPlants:Bra004891.1-P	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007117	InterPro:IPR036749	InterPro:LolPI	UniProt:M4CL05	PFAM:PF01357	PRINTS:PR00829
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	SUPFAM:SSF49590	UniParc:UPI0002547F0D	SEG:seg

Description

AT2G45110 (E=8e-043) ATEXPB4, EXPB4, ATHEXP BETA 1.1 | ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)

Coordinates

chrA05:+:2331494..2332478

Molecular Weight (calculated)

15266.2 Da

IEP (calculated)

9.895

GRAVY (calculated)

-0.383

Length

138 amino acids

Sequence
(BLAST)

001: MVAGGGRRRD RRRWRRKERV RVVREKGGLG ACAACLYQGT EIAFHVDAGS TPFYVAFVVE YENGEGDLAS VEIQPASGGF MPMQEMRSAE WKLNSGGPLS
101: GPFNIRLTSG ESRKVVVAQA VIPADWKPDQ TYRSIVNF

Best Arabidopsis Sequence Match ( AT1G65681.1 )
(BLAST)

001: MIGELDFPFL GAGSTGGACG FAVANPPLYG MVSAGGPSVF NNGIGCGTCF QILCNGHPAC SRRPITVTIT DECPGGPCAS EPAHFDLSGK AMGALARPGQ
101: GDRLRSAGVL RVYYRRVECL YRRTNIAFRM DPGANPYYIS FVVEYENGDG DLAYIEIQPA DGEFIPMQEM RSAVWKISSG SPLTGPFNIR LTSAESHKVV
201: LAYNVIPANW KPNETYRSVV NFK

Arabidopsis Description

EXPB6Expansin-B6 [Source:UniProtKB/Swiss-Prot;Acc:F4IBJ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.