Factsheet for Bra040107.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35606	Canola	extracellular	99.6	99.6
CDY42954	Canola	extracellular	99.2	99.2
Bra012684.1-P	Field mustard	extracellular	91.2	91.2
Bra012687.1-P	Field mustard	extracellular	90.4	90.4
AT4G17030.1	Thale cress	extracellular	90.0	90.0
KRH77296	Soybean	extracellular	60.0	59.76
KRH04222	Soybean	extracellular	60.0	59.76
KRH28194	Soybean	extracellular	58.8	58.57
KRH57515	Soybean	extracellular	58.4	58.17
VIT_00s1455g00010.t01	Wine grape	extracellular	53.6	53.39
Solyc08g077900.2.1	Tomato	extracellular	52.4	51.78
PGSC0003DMT400067456	Potato	extracellular	52.4	51.78
VIT_00s0309g00050.t01	Wine grape	extracellular	51.2	51.0
VIT_00s0309g00090.t01	Wine grape	extracellular	50.4	50.2
KRH04218	Soybean	extracellular	50.0	50.0
KRH04215	Soybean	nucleus	50.0	50.0
PGSC0003DMT400068379	Potato	mitochondrion	44.0	48.89
Solyc06g060970.1.1	Tomato	extracellular	48.4	48.79
KRH57508	Soybean	endoplasmic reticulum	47.2	48.36
KRH04220	Soybean	endoplasmic reticulum	46.8	47.18
KRH04221	Soybean	extracellular	44.8	45.34
PGSC0003DMT400067458	Potato	extracellular	45.2	45.02
KRH57512	Soybean	extracellular	44.4	44.94
PGSC0003DMT400067459	Potato	extracellular	43.2	43.03
Solyc08g077910.2.1	Tomato	extracellular	42.8	42.63
Bra033563.1-P	Field mustard	extracellular	34.4	32.58
Bra011899.1-P	Field mustard	extracellular	34.8	32.34
Bra004889.1-P	Field mustard	extracellular	33.6	30.55
Bra026272.1-P	Field mustard	extracellular	30.4	28.68
Bra024215.1-P	Field mustard	extracellular	30.0	28.3
Bra000370.1-P	Field mustard	extracellular	29.2	28.19
Bra036499.1-P	Field mustard	extracellular	29.6	27.92
Bra035987.1-P	Field mustard	extracellular	28.8	27.17
Bra004890.1-P	Field mustard	extracellular	32.4	25.47
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	12.8	23.19
Bra003421.1-P	Field mustard	extracellular	24.4	22.93
Bra014484.1-P	Field mustard	extracellular	24.4	16.94

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	EnsemblPlantsGene:Bra040107	EnsemblPlants:Bra040107.1	EnsemblPlants:Bra040107.1-P
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M4FG80	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF10	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000254431B
SEG:seg	:	:	:	:	:

Description

AT4G17030 (E=8e-129) ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1 | ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)

Coordinates

chrA01:+:10599338..10600757

Molecular Weight (calculated)

27826.1 Da

IEP (calculated)

6.756

GRAVY (calculated)

-0.177

Length

250 amino acids

Sequence
(BLAST)

001: MKTFNVLHLL LVQVIVLLPL LCLSDDFVSS RATYYGSPDC KGNPRGACGY GEFGRDINNG EVSGVSSRLW NNGTGCGACY QVRCKIPPHC NEEGVYVVAT
101: DYGEGHGTDF VFSPKAYGRM ARPGTEDQLY SFGVVDVEYQ RVPCKYDGYN LVYKVHEKSY NPHYLAVLIL YVGGVNDILA VEAWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NALPADWTAG ATYNSNILLT

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.