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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400068379 Potato mitochondrion 60.16 67.11
PGSC0003DMT400067459 Potato extracellular 58.17 58.17
VIT_00s0309g00090.t01 Wine grape extracellular 49.4 49.4
VIT_00s1455g00010.t01 Wine grape extracellular 49.0 49.0
VIT_00s0309g00050.t01 Wine grape extracellular 48.61 48.61
KRH77296 Soybean extracellular 47.81 47.81
PGSC0003DMT400067456 Potato extracellular 47.81 47.43
KRH28194 Soybean extracellular 47.01 47.01
KRH04222 Soybean extracellular 47.01 47.01
AT4G17030.1 Thale cress extracellular 46.61 46.8
KRH57515 Soybean extracellular 45.82 45.82
CDX90493 Canola cytosol, extracellular, nucleus 23.9 45.8
Bra012687.1-P Field mustard extracellular 45.42 45.6
Bra040107.1-P Field mustard extracellular 45.02 45.2
CDY42954 Canola extracellular 45.02 45.2
Bra012684.1-P Field mustard extracellular 44.62 44.8
CDY09659 Canola plasma membrane 44.62 44.8
CDY65447 Canola extracellular 44.62 44.8
CDY35606 Canola extracellular 44.62 44.8
KRH04221 Soybean extracellular 43.43 44.13
KRH57512 Soybean extracellular 43.43 44.13
PGSC0003DMT400052810 Potato extracellular 41.83 41.5
KRH57508 Soybean endoplasmic reticulum 40.24 41.39
KRH04215 Soybean nucleus 41.04 41.2
KRH04218 Soybean extracellular 41.04 41.2
PGSC0003DMT400004660 Potato extracellular 40.64 40.0
KRH04220 Soybean endoplasmic reticulum 38.65 39.11
PGSC0003DMT400047948 Potato extracellular 35.46 34.23
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 15.54 30.0
PGSC0003DMT400048506 Potato plastid 22.31 28.87
PGSC0003DMT400047177 Potato extracellular 29.08 27.34
PGSC0003DMT400055827 Potato extracellular 28.29 27.1
PGSC0003DMT400095086 Potato plastid 24.7 24.8
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 27.09 14.81
Protein Annotations
EntrezGene:102580120Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.4InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0005575GO:GO:0005576GO:GO:0016020GO:GO:0016021
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908UniProt:M1CHA3PFAM:PF01357
PFAM:PF03330EnsemblPlantsGene:PGSC0003DMG400026221PGSC:PGSC0003DMG400026221EnsemblPlants:PGSC0003DMT400067458PRINTS:PR01225PFscan:PS50842
PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF10InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSUPFAM:SSF49590
SUPFAM:SSF50685SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002968710RefSeq:XP_006359263.1:
Description
Major pollen allergen Ory s 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026221]
Coordinates
chr8:+:51064955..51067304
Molecular Weight (calculated)
27468.8 Da
IEP (calculated)
6.852
GRAVY (calculated)
-0.139
Length
251 amino acids
Sequence
(BLAST)
001: MDRSLKYSCI FMCMNIMLMP AFSYSQTLVS KASFYSTSDG MGTPSGACGY GDYGKDVNNG EVCTASRRLY RNGVGCGACY QVRCKNNALC SEEGTKVVVT
101: DSADGQETDL ILSFKAYAKL AKTPSLAAHL CGKGVVDIEY RRVSCGYGGN LMVKIHEHSK YADYLAIVVL NQGGATDIHA VEIYEEESQQ WISMRKAYGA
201: VWDLSNPPCG DLKVRFLTST SVESKWVQSD KAVIPAQWKV GLTIETDIQL T
Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)
001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Arabidopsis Description
EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.