Factsheet for Bra012687.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90493	Canola	cytosol, extracellular, nucleus	52.0	99.24
Bra012684.1-P	Field mustard	extracellular	97.6	97.6
CDY09659	Canola	plasma membrane	96.8	96.8
Bra040107.1-P	Field mustard	extracellular	90.4	90.4
AT4G17030.1	Thale cress	extracellular	88.4	88.4
KRH77296	Soybean	extracellular	62.0	61.75
KRH04222	Soybean	extracellular	61.6	61.35
KRH28194	Soybean	extracellular	60.8	60.56
KRH57515	Soybean	extracellular	60.0	59.76
VIT_00s1455g00010.t01	Wine grape	extracellular	54.8	54.58
Solyc08g077900.2.1	Tomato	extracellular	53.2	52.57
VIT_00s0309g00050.t01	Wine grape	extracellular	52.4	52.19
PGSC0003DMT400067456	Potato	extracellular	52.4	51.78
VIT_00s0309g00090.t01	Wine grape	extracellular	51.6	51.39
KRH04218	Soybean	extracellular	51.2	51.2
KRH04215	Soybean	nucleus	51.2	51.2
PGSC0003DMT400068379	Potato	mitochondrion	45.6	50.67
Solyc06g060970.1.1	Tomato	extracellular	49.6	50.0
KRH57508	Soybean	endoplasmic reticulum	46.8	47.95
KRH04221	Soybean	extracellular	47.2	47.77
KRH04220	Soybean	endoplasmic reticulum	47.2	47.58
KRH57512	Soybean	extracellular	46.4	46.96
PGSC0003DMT400067458	Potato	extracellular	45.6	45.42
PGSC0003DMT400067459	Potato	extracellular	43.6	43.43
Solyc08g077910.2.1	Tomato	extracellular	43.2	43.03
Bra033563.1-P	Field mustard	extracellular	35.2	33.33
Bra011899.1-P	Field mustard	extracellular	35.2	32.71
Bra004889.1-P	Field mustard	extracellular	33.6	30.55
Bra026272.1-P	Field mustard	extracellular	30.4	28.68
Bra024215.1-P	Field mustard	extracellular	30.4	28.68
Bra000370.1-P	Field mustard	extracellular	29.2	28.19
Bra035987.1-P	Field mustard	extracellular	29.6	27.92
Bra036499.1-P	Field mustard	extracellular	29.6	27.92
Bra004890.1-P	Field mustard	extracellular	32.8	25.79
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	12.8	23.19
Bra003421.1-P	Field mustard	extracellular	24.0	22.56
Bra014484.1-P	Field mustard	extracellular	25.6	17.78

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	EnsemblPlantsGene:Bra012687	EnsemblPlants:Bra012687.1	EnsemblPlants:Bra012687.1-P
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M4D877	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF10	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002540930	SEG:seg	:	:	:	:

Description

AT4G17030 (E=2e-124) ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1 | ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)

Coordinates

chrA03:-:22740165..22741704

Molecular Weight (calculated)

27855.3 Da

IEP (calculated)

6.969

GRAVY (calculated)

-0.162

Length

250 amino acids

Sequence
(BLAST)

001: MKKPHVLLLL LVQVIVLLPL LCLSDDFVSS RATYYGSPDC KGNPRGACGY GELGRDINDG EVSGVSSRLW KNGAGCGACY QVRCKIPPHC NEEGVYVVAT
101: DYGEGDGTDF IFSPKAYGRM ARPGTEFQLY SFGVVDVEYQ RVPCRYGGYN LVYKIHEKSY NPHYLAILIL YVGGVNDILA VEVWQEDCKE WKRMRRVFGA
201: VHDYQNPPRG TLSLRFLVYG SAGLNWVESQ NPLPADWTAG ATYNSNILLT

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.