Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040107.1-P | Field mustard | extracellular | 90.0 | 90.0 |
| CDY35606 | Canola | extracellular | 89.6 | 89.6 |
| CDX90493 | Canola | cytosol, extracellular, nucleus | 46.8 | 89.31 |
| CDY42954 | Canola | extracellular | 89.2 | 89.2 |
| CDY65447 | Canola | extracellular | 88.4 | 88.4 |
| Bra012687.1-P | Field mustard | extracellular | 88.4 | 88.4 |
| Bra012684.1-P | Field mustard | extracellular | 88.4 | 88.4 |
| CDY09659 | Canola | plasma membrane | 86.8 | 86.8 |
| KRH77296 | Soybean | extracellular | 60.0 | 59.76 |
| KRH04222 | Soybean | extracellular | 59.6 | 59.36 |
| KRH28194 | Soybean | extracellular | 58.4 | 58.17 |
| KRH57515 | Soybean | extracellular | 58.0 | 57.77 |
| VIT_00s1455g00010.t01 | Wine grape | extracellular | 54.8 | 54.58 |
| VIT_00s0309g00050.t01 | Wine grape | extracellular | 52.0 | 51.79 |
| PGSC0003DMT400067456 | Potato | extracellular | 52.4 | 51.78 |
| Solyc08g077900.2.1 | Tomato | extracellular | 52.4 | 51.78 |
| VIT_00s0309g00090.t01 | Wine grape | extracellular | 51.2 | 51.0 |
| KRH04218 | Soybean | extracellular | 50.4 | 50.4 |
| KRH04215 | Soybean | nucleus | 50.4 | 50.4 |
| PGSC0003DMT400068379 | Potato | mitochondrion | 44.4 | 49.33 |
| Solyc06g060970.1.1 | Tomato | extracellular | 48.4 | 48.79 |
| PGSC0003DMT400067458 | Potato | extracellular | 46.8 | 46.61 |
| KRH57508 | Soybean | endoplasmic reticulum | 45.2 | 46.31 |
| KRH04220 | Soybean | endoplasmic reticulum | 45.2 | 45.56 |
| KRH04221 | Soybean | extracellular | 44.0 | 44.53 |
| KRH57512 | Soybean | extracellular | 43.6 | 44.13 |
| PGSC0003DMT400067459 | Potato | extracellular | 44.0 | 43.82 |
| Solyc08g077910.2.1 | Tomato | extracellular | 43.6 | 43.43 |
| AT3G45960.2 | Thale cress | extracellular | 34.0 | 32.32 |
| AT3G45970.1 | Thale cress | extracellular | 34.0 | 32.08 |
| AT4G38400.1 | Thale cress | extracellular | 34.0 | 32.08 |
| AT1G65680.1 | Thale cress | extracellular | 32.4 | 29.67 |
| AT1G65681.1 | Thale cress | cytosol | 26.4 | 29.6 |
| AT2G45110.1 | Thale cress | extracellular | 29.2 | 28.19 |
| AT4G28250.1 | Thale cress | extracellular | 29.6 | 28.03 |
| AT2G20750.1 | Thale cress | extracellular | 30.0 | 27.68 |
| AT3G60570.1 | Thale cress | extracellular | 25.2 | 23.86 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.4 | EntrezGene:827411 | ProteinID:AEE83841.1 | EMBL:AK228226 |
| ArrayExpress:AT4G17030 | EnsemblPlantsGene:AT4G17030 | RefSeq:AT4G17030 | TAIR:AT4G17030 | RefSeq:AT4G17030-TAIR-G | EnsemblPlants:AT4G17030.1 |
| TAIR:AT4G17030.1 | Symbol:ATEXLB1 | Unigene:At.33028 | EMBL:BT005867 | ProteinID:CAB10483.1 | ProteinID:CAB80974.1 |
| InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | InterPro:LolPI | RefSeq:NP_193436.2 | UniProt:O23547 | PFAM:PF01357 | PFAM:PF03330 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009015 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00829 |
| PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF10 | UniProt:Q0WRS3 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | UniParc:UPI0000060D7C |
| SEG:seg | : | : | : | : | : |
Description
EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
Coordinates
chr4:-:9581562..9583290
Molecular Weight (calculated)
27935.3 Da
IEP (calculated)
7.109
GRAVY (calculated)
-0.148
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.