Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70406 | Canola | extracellular | 78.02 | 77.74 |
| CDX74710 | Canola | extracellular | 77.66 | 77.37 |
| Bra004889.1-P | Field mustard | extracellular | 77.66 | 77.09 |
| CDY18951 | Canola | extracellular | 75.09 | 74.55 |
| CDY18948 | Canola | extracellular | 51.65 | 72.31 |
| VIT_15s0021g02700.t01 | Wine grape | extracellular | 64.1 | 64.1 |
| VIT_15s0021g02670.t01 | Wine grape | extracellular | 62.64 | 62.64 |
| Bra004890.1-P | Field mustard | extracellular | 71.43 | 61.32 |
| KRH75302 | Soybean | extracellular | 58.61 | 57.76 |
| Os04t0552000-00 | Rice | extracellular | 55.31 | 57.2 |
| CDX74713 | Canola | extracellular | 71.79 | 57.14 |
| KRG88934 | Soybean | extracellular, vacuole | 57.51 | 56.68 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 49.08 | 56.54 |
| TraesCS2B01G432300.1 | Wheat | plastid | 53.85 | 56.11 |
| Os05t0246300-01 | Rice | extracellular | 54.21 | 56.06 |
| Zm00001d017493_P001 | Maize | extracellular | 54.58 | 55.81 |
| Zm00001d026170_P001 | Maize | extracellular | 53.48 | 55.73 |
| EES11234 | Sorghum | extracellular | 53.48 | 55.51 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 53.11 | 55.34 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 53.11 | 55.34 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 53.11 | 55.34 |
| EES07509 | Sorghum | extracellular | 53.48 | 55.3 |
| KRH33426 | Soybean | extracellular | 54.95 | 55.15 |
| Zm00001d051368_P001 | Maize | extracellular | 31.87 | 55.06 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 52.38 | 54.58 |
| KRH33423 | Soybean | extracellular | 55.31 | 54.51 |
| KXG19818 | Sorghum | extracellular | 51.65 | 54.44 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 49.45 | 54.22 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 49.82 | 54.18 |
| EER88254 | Sorghum | extracellular | 51.28 | 54.05 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 50.18 | 53.94 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 49.08 | 53.82 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 49.08 | 53.82 |
| KRH65410 | Soybean | extracellular | 52.38 | 53.56 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 49.82 | 53.54 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 50.55 | 52.87 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 49.08 | 52.55 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 50.92 | 52.45 |
| Zm00001d045861_P001 | Maize | mitochondrion | 50.92 | 52.45 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 47.99 | 52.19 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 48.35 | 51.97 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 48.35 | 51.97 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 53.48 | 51.59 |
| Zm00001d045792_P001 | Maize | extracellular | 50.92 | 51.48 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 49.82 | 51.13 |
| TraesCSU01G009600.1 | Wheat | extracellular | 47.25 | 50.99 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 49.08 | 50.38 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 48.72 | 50.19 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 46.15 | 50.0 |
| Os02t0658600-00 | Rice | plastid | 49.82 | 49.82 |
| AT1G65681.1 | Thale cress | cytosol | 40.66 | 49.78 |
| AT2G45110.1 | Thale cress | extracellular | 46.89 | 49.42 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 45.42 | 48.82 |
| GSMUA_AchrUn_... | Banana | extracellular | 31.87 | 48.33 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 44.32 | 47.64 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 41.39 | 47.28 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 32.97 | 47.12 |
| AT3G60570.1 | Thale cress | extracellular | 44.69 | 46.21 |
| AT4G28250.1 | Thale cress | extracellular | 42.86 | 44.32 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 44.32 | 41.44 |
| AT2G20750.1 | Thale cress | extracellular | 41.03 | 41.33 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 45.05 | 39.94 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 44.69 | 39.48 |
| EER93754 | Sorghum | extracellular | 43.96 | 39.22 |
| Os03t0645000-00 | Rice | mitochondrion | 44.69 | 38.98 |
| KXG37946 | Sorghum | extracellular | 45.05 | 37.85 |
| AT4G17030.1 | Thale cress | extracellular | 29.67 | 32.4 |
| AT4G38400.1 | Thale cress | extracellular | 29.67 | 30.57 |
| HORVU5Hr1G092910.9 | Barley | plastid | 45.05 | 29.71 |
| AT3G45960.2 | Thale cress | extracellular | 28.21 | 29.28 |
| AT3G45970.1 | Thale cress | extracellular | 28.21 | 29.06 |
| Zm00001d033231_P003 | Maize | extracellular | 43.22 | 16.53 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:842879 | ProteinID:AAB60916.1 | ProteinID:AAF23829.1 |
| ProteinID:AEE34410.1 | ArrayExpress:AT1G65680 | EnsemblPlantsGene:AT1G65680 | RefSeq:AT1G65680 | TAIR:AT1G65680 | RefSeq:AT1G65680-TAIR-G |
| EnsemblPlants:AT1G65680.1 | TAIR:AT1G65680.1 | Symbol:ATEXPB2 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009826 | GO:GO:0009828 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0019953 | GO:GO:0030312 | GO:GO:0040007 | GO:GO:0071555 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | RefSeq:NP_564860.3 |
| PFAM:PF01357 | PFAM:PF03330 | PO:PO:0009005 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF3 | UniProt:Q9SHY6 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | TMHMM:TMhelix | UniParc:UPI000012A330 | SEG:seg |
Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
Coordinates
chr1:+:24427266..24428673
Molecular Weight (calculated)
29128.8 Da
IEP (calculated)
8.240
GRAVY (calculated)
0.038
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.