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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18948 Canola extracellular 63.27 89.23
CDX74710 Canola extracellular 81.82 82.12
CDY70406 Canola extracellular 81.09 81.39
AT1G65680.1 Thale cress extracellular 74.55 75.09
CDX74713 Canola extracellular 87.64 70.26
VIT_15s0021g02700.t01 Wine grape extracellular 61.45 61.9
VIT_15s0021g02670.t01 Wine grape extracellular 61.09 61.54
TraesCS2A01G413600.1 Wheat extracellular 55.27 58.02
TraesCS2D01G411000.1 Wheat extracellular 55.27 58.02
TraesCS2B01G432300.1 Wheat plastid 55.27 58.02
EES11234 Sorghum extracellular 54.55 57.03
Zm00001d026170_P001 Maize extracellular 54.18 56.87
Os04t0552000-00 Rice extracellular 54.55 56.82
KRG88934 Soybean extracellular, vacuole 56.73 56.32
GSMUA_Achr2P13730_001 Banana extracellular 53.45 56.11
Os05t0246300-01 Rice extracellular 53.82 56.06
EER88254 Sorghum extracellular 52.36 55.6
KXG19818 Sorghum extracellular 52.36 55.6
KRH75302 Soybean extracellular 56.0 55.6
KRH65410 Soybean extracellular 53.82 55.43
GSMUA_Achr2P13740_001 Banana extracellular 52.73 55.34
EES07509 Sorghum extracellular 53.09 55.3
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 47.64 55.27
HORVU2Hr1G097480.1 Barley extracellular 56.0 54.42
KRH33426 Soybean extracellular 53.82 54.41
HORVU0Hr1G016380.2 Barley extracellular 52.0 53.96
Zm00001d017493_P001 Maize extracellular 52.36 53.93
TraesCS2B01G607400.1 Wheat extracellular 48.36 53.41
GSMUA_Achr2P13750_001 Banana extracellular 50.55 53.26
Zm00001d045861_P001 Maize mitochondrion 51.27 53.21
TraesCS2D01G592900.1 Wheat extracellular 48.0 53.01
HORVU2Hr1G013360.1 Barley extracellular 48.36 52.99
TraesCS2A01G580200.1 Wheat extracellular 48.36 52.99
KRH33423 Soybean extracellular 53.09 52.71
TraesCS2A01G580300.1 Wheat extracellular 47.64 52.61
Zm00001d051368_P001 Maize extracellular 30.18 52.53
Zm00001d045792_P001 Maize extracellular 51.27 52.22
TraesCS2A01G081200.1 Wheat extracellular 48.0 51.97
TraesCS6D01G231400.1 Wheat extracellular 50.18 51.88
TraesCS6A01G249700.1 Wheat extracellular 50.18 51.88
TraesCS2D01G078900.1 Wheat extracellular 47.64 51.57
TraesCS2B01G095600.1 Wheat extracellular 47.64 51.37
Os02t0658600-00 Rice plastid 50.91 51.28
CDY18950 Canola cytosol, extracellular, plastid 44.0 51.05
TraesCS2A01G080800.1 Wheat extracellular 46.91 50.79
TraesCS2D01G078800.1 Wheat extracellular 46.91 50.79
TraesCSU01G009600.1 Wheat extracellular 46.55 50.59
TraesCS6A01G249400.2 Wheat extracellular 48.73 50.57
CDY72345 Canola cytosol 44.36 50.0
TraesCS2B01G095700.1 Wheat extracellular 45.82 50.0
TraesCS2D01G104800.1 Wheat extracellular 45.45 49.21
TraesCS2B01G122100.1 Wheat extracellular 33.82 48.69
TraesCS2A01G105200.1 Wheat extracellular 44.73 48.43
CDX74711 Canola extracellular 45.82 48.28
CDX83404 Canola extracellular 44.36 47.1
CDY18946 Canola extracellular 45.45 46.99
GSMUA_AchrUn_... Banana extracellular 30.55 46.67
TraesCS2D01G078600.1 Wheat extracellular 40.0 46.03
CDY72505 Canola cytosol 26.55 45.62
CDY72655 Canola cytosol, plastid 28.0 45.56
CDY14888 Canola extracellular 42.55 44.15
CDX96901 Canola extracellular 42.55 44.15
HORVU2Hr1G013340.1 Barley extracellular 45.45 42.81
CDX95627 Canola extracellular 42.55 41.94
TraesCS5D01G384200.1 Wheat extracellular 46.91 41.88
EER93754 Sorghum extracellular 46.18 41.5
TraesCS5B01G376500.1 Wheat extracellular 46.55 41.42
CDY18990 Canola extracellular 39.64 41.13
CDX67835 Canola extracellular 39.27 40.6
CDY05789 Canola extracellular 38.91 40.38
CDY71186 Canola extracellular 39.64 40.22
CDY31940 Canola extracellular 38.55 40.0
KXG37946 Sorghum extracellular 46.91 39.69
CDY70556 Canola extracellular 38.18 39.62
Os03t0645000-00 Rice mitochondrion 44.73 39.3
CDY58728 Canola extracellular 37.82 39.25
CDX90493 Canola cytosol, extracellular, nucleus 16.73 35.11
CDY09659 Canola plasma membrane 31.64 34.8
CDY65447 Canola extracellular 31.64 34.8
CDY42954 Canola extracellular 31.27 34.4
CDY35606 Canola extracellular 30.91 34.0
HORVU5Hr1G092910.9 Barley plastid 46.91 31.16
CDY48362 Canola extracellular 40.36 31.09
CDY69288 Canola extracellular 28.0 29.17
CDY52801 Canola extracellular 28.36 29.0
CDY61895 Canola extracellular 28.0 28.62
CDY64278 Canola extracellular 27.27 28.3
CDY72634 Canola extracellular 27.27 28.3
Zm00001d033231_P003 Maize extracellular 44.73 17.23
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1GO:A0A078G0Z1UniProt:A0A078G0Z1EnsemblPlants:CDY18951
ProteinID:CDY18951ProteinID:CDY18951.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953EnsemblPlantsGene:GSBRNA2T00006168001
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357
PFAM:PF03330PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692
PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE96BBSEG:seg::
Description
BnaC04g03990DBnaC04g03990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0Z1]
Coordinates
chrLK032090:-:606631..607783
Molecular Weight (calculated)
29459.2 Da
IEP (calculated)
5.243
GRAVY (calculated)
0.140
Length
275 amino acids
Sequence
(BLAST)
001: MAILVLERCY MIMNLLLVLT FVLLHSAHCF NPKRLNVSAV AGDSDWSLAA ATFYGLPTGY GTDDGACGYK NAVAQAPFLS MVSAGGPSLY KSGRGCGACY
101: QIKCTSNQAC STNPVTVVIT DECGQGCLTE SVHFDLSGTA FGAMAVPGQD SQLRNAGVLQ ILYRKVECNY NGEMVVFQVD GGSNAYYFAA LVEYVNGDGE
201: IGQVELKQAL ESDTWLPMSH SWGAVWKLEV TSPLRAPLSL RLTYLDSGKT VVASDVIPAG WQPGAKYKSN VNFQV
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.