Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31940 | Canola | extracellular | 97.36 | 97.36 |
| AT2G20750.1 | Thale cress | extracellular | 87.55 | 85.61 |
| CDY70556 | Canola | extracellular | 73.96 | 73.96 |
| CDY58728 | Canola | extracellular | 73.58 | 73.58 |
| CDY18990 | Canola | extracellular | 73.21 | 73.21 |
| VIT_12s0059g00190.t01 | Wine grape | extracellular | 63.77 | 65.25 |
| PGSC0003DMT400055827 | Potato | extracellular | 63.77 | 64.5 |
| KRH26935 | Soybean | extracellular | 63.4 | 64.37 |
| KRH55988 | Soybean | extracellular | 64.53 | 64.04 |
| KRH25552 | Soybean | extracellular | 64.53 | 64.04 |
| Solyc10g008440.2.1 | Tomato | extracellular | 63.02 | 63.74 |
| TraesCS6A01G235800.1 | Wheat | extracellular | 64.15 | 63.67 |
| Os02t0639500-01 | Rice | extracellular | 62.64 | 63.6 |
| GSMUA_AchrUn_... | Banana | extracellular | 62.64 | 63.12 |
| TraesCS6D01G218500.1 | Wheat | extracellular | 63.77 | 63.06 |
| Solyc07g054170.2.1 | Tomato | extracellular | 63.4 | 62.92 |
| TraesCS6B01G264400.1 | Wheat | extracellular | 63.4 | 62.69 |
| PGSC0003DMT400047177 | Potato | extracellular | 63.02 | 62.55 |
| GSMUA_Achr5P12080_001 | Banana | extracellular | 62.64 | 62.17 |
| Zm00001d017377_P001 | Maize | extracellular | 62.64 | 61.94 |
| KRH22402 | Soybean | extracellular | 60.0 | 61.63 |
| GSMUA_Achr1P00120_001 | Banana | extracellular | 61.51 | 61.28 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 61.89 | 61.19 |
| EES05488 | Sorghum | extracellular | 63.02 | 61.17 |
| TraesCS2D01G369200.2 | Wheat | extracellular | 61.13 | 58.06 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 61.51 | 58.01 |
| TraesCS2B01G390000.1 | Wheat | extracellular | 61.51 | 58.01 |
| Zm00001d002860_P002 | Maize | extracellular | 62.64 | 54.43 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 38.49 | 43.04 |
| CDY72345 | Canola | cytosol | 38.87 | 42.21 |
| CDX74710 | Canola | extracellular | 42.26 | 40.88 |
| CDX74711 | Canola | extracellular | 40.0 | 40.61 |
| CDX83404 | Canola | extracellular | 39.62 | 40.54 |
| CDY70406 | Canola | extracellular | 41.89 | 40.51 |
| CDY18948 | Canola | extracellular | 29.06 | 39.49 |
| CDY18946 | Canola | extracellular | 39.62 | 39.47 |
| CDY18951 | Canola | extracellular | 40.38 | 38.91 |
| CDY72505 | Canola | cytosol | 22.26 | 36.88 |
| CDX96901 | Canola | extracellular | 36.6 | 36.6 |
| CDY72655 | Canola | cytosol, plastid | 23.02 | 36.09 |
| CDY14888 | Canola | extracellular | 35.85 | 35.85 |
| CDY71186 | Canola | extracellular | 35.85 | 35.06 |
| CDX95627 | Canola | extracellular | 36.6 | 34.77 |
| CDX67835 | Canola | extracellular | 34.34 | 34.21 |
| Os04t0530100-01 | Rice | extracellular, mitochondrion, vacuole | 38.49 | 31.58 |
| CDY09659 | Canola | plasma membrane | 28.68 | 30.4 |
| CDY65447 | Canola | extracellular | 28.3 | 30.0 |
| CDY42954 | Canola | extracellular | 28.3 | 30.0 |
| CDY35606 | Canola | extracellular | 27.92 | 29.6 |
| CDX74713 | Canola | extracellular | 38.11 | 29.45 |
| CDX90493 | Canola | cytosol, extracellular, nucleus | 13.21 | 26.72 |
| CDY69288 | Canola | extracellular | 26.04 | 26.14 |
| CDY48362 | Canola | extracellular | 35.09 | 26.05 |
| CDY52801 | Canola | extracellular | 26.04 | 25.65 |
| CDY72634 | Canola | extracellular | 25.28 | 25.28 |
| CDY64278 | Canola | extracellular | 25.28 | 25.28 |
| CDY61895 | Canola | extracellular | 25.66 | 25.28 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.3 | GO:A0A078EYZ9 | EnsemblPlants:CDY05789 | ProteinID:CDY05789 |
| ProteinID:CDY05789.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | EnsemblPlantsGene:GSBRNA2T00120870001 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF26 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| UniParc:UPI0004EB0277 | SEG:seg | : | : | : | : |
Description
BnaC07g00140D
Coordinates
chrLK031964:+:1005405..1007078
Molecular Weight (calculated)
28651.6 Da
IEP (calculated)
10.037
GRAVY (calculated)
-0.098
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLLPTLCFL FLQLLPRGDA STSHSNRHRS APHWLPATAT WYGSPEGDGS SGGACGYGSL VDVKPFKARV GAVSPLLFKS GEGCGACYKV RCLDKTICSK
101: RAVTIIVTDQ SPSGPSARAK HTHFDLSGAA FGHLAIPGHS GIIRNRGLIS LLYRRTACKY REKNIAFHVN AGSTAYWLSL LIEYEDGEGD IGSMHIRQAG
201: SKEWIAMKHI WGANWCIVGG PLKGPLSVKL TTLSNNKTLS AADVIPKKWV PKATYTSRLN FSPVL
101: RAVTIIVTDQ SPSGPSARAK HTHFDLSGAA FGHLAIPGHS GIIRNRGLIS LLYRRTACKY REKNIAFHVN AGSTAYWLSL LIEYEDGEGD IGSMHIRQAG
201: SKEWIAMKHI WGANWCIVGG PLKGPLSVKL TTLSNNKTLS AADVIPKKWV PKATYTSRLN FSPVL
001: MQLFPVILPT LCVFLHLLIS GSGSTPPLTH SNQQVAATRW LPATATWYGS AEGDGSSGGA CGYGSLVDVK PFKARVGAVS PILFKGGEGC GACYKVRCLD
101: KTICSKRAVT IIATDQSPSG PSAKAKHTHF DLSGAAFGHM AIPGHNGVIR NRGLLNILYR RTACKYRGKN IAFHVNAGST DYWLSLLIEY EDGEGDIGSM
201: HIRQAGSKEW ISMKHIWGAN WCIVEGPLKG PFSVKLTTLS NNKTLSATDV IPSNWVPKAT YTSRLNFSPV L
101: KTICSKRAVT IIATDQSPSG PSAKAKHTHF DLSGAAFGHM AIPGHNGVIR NRGLLNILYR RTACKYRGKN IAFHVNAGST DYWLSLLIEY EDGEGDIGSM
201: HIRQAGSKEW ISMKHIWGAN WCIVEGPLKG PFSVKLTTLS NNKTLSATDV IPSNWVPKAT YTSRLNFSPV L
Arabidopsis Description
EXPB1Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.