Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G264400.1 | Wheat | extracellular | 98.13 | 97.76 |
| TraesCS6D01G218500.1 | Wheat | extracellular | 96.63 | 96.27 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 93.63 | 93.28 |
| Os02t0639500-01 | Rice | extracellular | 83.9 | 85.82 |
| Zm00001d017377_P001 | Maize | extracellular | 83.15 | 82.84 |
| EES05488 | Sorghum | extracellular | 83.9 | 82.05 |
| GSMUA_AchrUn_... | Banana | extracellular | 72.66 | 73.76 |
| GSMUA_Achr1P00120_001 | Banana | extracellular | 70.04 | 70.3 |
| GSMUA_Achr5P12080_001 | Banana | extracellular | 69.66 | 69.66 |
| VIT_12s0059g00190.t01 | Wine grape | extracellular | 67.42 | 69.5 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 73.03 | 69.39 |
| KRH26935 | Soybean | extracellular | 65.54 | 67.05 |
| Bra026272.1-P | Field mustard | extracellular | 65.92 | 66.42 |
| CDY18990 | Canola | extracellular | 65.54 | 66.04 |
| CDY58728 | Canola | extracellular | 65.17 | 65.66 |
| CDY70556 | Canola | extracellular | 65.17 | 65.66 |
| Bra024215.1-P | Field mustard | extracellular | 65.17 | 65.66 |
| AT4G28250.1 | Thale cress | extracellular | 64.42 | 65.15 |
| Solyc07g054170.2.1 | Tomato | extracellular | 64.79 | 64.79 |
| CDY05789 | Canola | extracellular | 63.67 | 64.15 |
| PGSC0003DMT400047177 | Potato | extracellular | 64.04 | 64.04 |
| CDY31940 | Canola | extracellular | 63.3 | 63.77 |
| Bra036499.1-P | Field mustard | extracellular | 63.3 | 63.77 |
| Solyc10g008440.2.1 | Tomato | extracellular | 62.55 | 63.74 |
| PGSC0003DMT400055827 | Potato | extracellular | 62.17 | 63.36 |
| KRH22402 | Soybean | extracellular | 59.93 | 62.02 |
| AT2G20750.1 | Thale cress | extracellular | 62.17 | 61.25 |
| KRH25552 | Soybean | extracellular | 60.67 | 60.67 |
| KRH55988 | Soybean | extracellular | 60.3 | 60.3 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 43.07 | 46.18 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 43.07 | 45.82 |
| TraesCS5A01G537300.1 | Wheat | cytosol, extracellular, plastid | 27.34 | 45.34 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 42.7 | 43.02 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 42.7 | 42.86 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 40.07 | 42.13 |
| TraesCS2A01G413400.1 | Wheat | extracellular | 40.82 | 41.76 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 39.33 | 41.34 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 38.95 | 40.94 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 39.33 | 40.08 |
| TraesCS6A01G249300.1 | Wheat | extracellular | 42.32 | 39.1 |
| TraesCS2A01G413500.1 | Wheat | extracellular, plastid | 40.82 | 38.79 |
| TraesCS6A01G249200.1 | Wheat | extracellular | 41.57 | 38.68 |
| TraesCS3A01G011100.1 | Wheat | extracellular | 38.95 | 37.96 |
| TraesCS3A01G011200.1 | Wheat | cytosol | 22.47 | 37.5 |
| TraesCS1A01G212000.1 | Wheat | extracellular | 37.83 | 37.41 |
| TraesCS3A01G488000.1 | Wheat | extracellular | 40.45 | 37.37 |
| TraesCS1A01G208200.1 | Wheat | extracellular | 37.08 | 37.36 |
| TraesCS1A01G212400.1 | Wheat | extracellular | 36.33 | 36.6 |
| TraesCS1A01G212300.1 | Wheat | extracellular | 37.45 | 36.5 |
| TraesCS1A01G212600.1 | Wheat | extracellular | 37.45 | 35.97 |
| TraesCS2A01G458900.1 | Wheat | extracellular | 35.21 | 35.47 |
| TraesCS1A01G212200.1 | Wheat | extracellular | 35.96 | 35.42 |
| TraesCS5A01G538000.1 | Wheat | extracellular | 37.45 | 35.21 |
| TraesCS6A01G032700.1 | Wheat | extracellular | 35.96 | 35.16 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 35.21 | 34.81 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 35.21 | 34.81 |
| TraesCS6A01G217100.1 | Wheat | extracellular | 37.83 | 34.01 |
| TraesCS3A01G480000.1 | Wheat | extracellular | 38.95 | 32.4 |
| TraesCS3A01G479900.1 | Wheat | extracellular | 38.2 | 31.97 |
| TraesCS5A01G073100.1 | Wheat | extracellular, plasma membrane | 37.45 | 29.24 |
| TraesCS5A01G499300.1 | Wheat | nucleus | 26.97 | 26.37 |
| TraesCS1A01G203200.1 | Wheat | extracellular | 27.72 | 26.24 |
| TraesCS7A01G545900.1 | Wheat | extracellular | 30.34 | 26.21 |
| TraesCS5A01G499200.1 | Wheat | extracellular | 25.47 | 25.86 |
| TraesCS5A01G498900.1 | Wheat | extracellular | 26.59 | 25.82 |
| TraesCS5A01G499100.1 | Wheat | extracellular | 23.97 | 25.6 |
| TraesCS7A01G545800.1 | Wheat | extracellular | 28.09 | 24.92 |
| TraesCS7A01G546300.1 | Wheat | endoplasmic reticulum, extracellular | 27.72 | 23.05 |
| TraesCS7A01G546000.1 | Wheat | endoplasmic reticulum, extracellular | 26.59 | 21.98 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.3 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
| PANTHER:PTHR31692:SF5 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G235800 | EnsemblPlants:TraesCS6A01G235800.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:+:445411902..445415641
Molecular Weight (calculated)
28291.8 Da
IEP (calculated)
8.802
GRAVY (calculated)
0.018
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGSATSGS CALLVSILSA ALLFGVGEAG AVRKAVDPEW HQATATWYGS AEGDGSDGGA CGYGTLVDVV PMKARVGAVS PVLFKSGEGC GACYKVRCLD
101: RGICSRRAVT VIVTDECPGG YCSLGRTHFD LSGAAFGRLA VAGHAGQLRN RGEISVVFRR TPCKYRGKNI AFRVVEGSTT FWLSLLVEFE DGDGDIGSMQ
201: LKQANSAQWQ DMKHIWGATW SLTPGPLVGP FSVRLTTLTT KKTLSAQDVI PRNWTPKATY TSRLNFA
101: RGICSRRAVT VIVTDECPGG YCSLGRTHFD LSGAAFGRLA VAGHAGQLRN RGEISVVFRR TPCKYRGKNI AFRVVEGSTT FWLSLLVEFE DGDGDIGSMQ
201: LKQANSAQWQ DMKHIWGATW SLTPGPLVGP FSVRLTTLTT KKTLSAQDVI PRNWTPKATY TSRLNFA
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Arabidopsis Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.