Factsheet for TraesCS1A01G212000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G225700.1	Wheat	extracellular	96.67	86.42
TraesCS1D01G215100.1	Wheat	plastid	79.26	75.62
Os10t0555600-01	Rice	extracellular	74.81	73.45
TraesCS1A01G212400.1	Wheat	extracellular	71.85	73.21
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	41.85	70.19
TraesCS1A01G212600.1	Wheat	extracellular	70.0	67.99
TraesCS1A01G212300.1	Wheat	extracellular	66.67	65.69
TraesCS6A01G032700.1	Wheat	extracellular	64.81	64.1
TraesCS5A01G538000.1	Wheat	extracellular	65.19	61.97
TraesCS3A01G011100.1	Wheat	extracellular	62.59	61.68
TraesCS3A01G011200.1	Wheat	cytosol	35.56	60.0
TraesCS1A01G212200.1	Wheat	extracellular	59.26	59.04
TraesCS6A01G217100.1	Wheat	extracellular	62.59	56.9
TraesCS1A01G208200.1	Wheat	extracellular	51.48	52.45
TraesCS3A01G480000.1	Wheat	extracellular	61.11	51.4
GSMUA_AchrUn_...	Banana	extracellular	17.41	51.09
TraesCS3A01G479900.1	Wheat	extracellular	60.0	50.78
TraesCS6A01G249700.1	Wheat	extracellular	49.26	50.0
TraesCS2A01G081200.1	Wheat	extracellular	47.04	50.0
TraesCS2A01G458900.1	Wheat	extracellular	48.52	49.43
TraesCS6A01G249400.2	Wheat	extracellular	48.52	49.43
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	62.59	49.42
TraesCS2A01G080800.1	Wheat	extracellular	45.93	48.82
TraesCS2A01G413600.1	Wheat	extracellular	47.04	48.47
TraesCS2A01G413400.1	Wheat	extracellular	46.67	48.28
TraesCS2A01G580300.1	Wheat	extracellular	44.44	48.19
TraesCS5A01G530100.1	Wheat	extracellular	48.15	48.15
TraesCS5A01G530700.1	Wheat	extracellular	47.78	47.78
TraesCS2A01G580200.1	Wheat	extracellular	44.07	47.41
TraesCS6A01G249200.1	Wheat	extracellular	49.63	46.69
TraesCS2A01G105200.1	Wheat	extracellular	43.33	46.06
TraesCS6A01G249300.1	Wheat	extracellular	47.78	44.64
TraesCS3A01G488000.1	Wheat	extracellular	45.93	42.91
TraesCS2A01G413500.1	Wheat	extracellular, plastid	43.7	41.99
TraesCS6A01G235800.1	Wheat	extracellular	37.41	37.83
TraesCS2A01G373000.1	Wheat	extracellular	34.81	33.45
TraesCS5A01G499200.1	Wheat	extracellular	24.81	25.48
TraesCS5A01G498900.1	Wheat	extracellular	25.56	25.09
TraesCS5A01G499300.1	Wheat	nucleus	25.19	24.91
TraesCS5A01G499100.1	Wheat	extracellular	21.85	23.6
TraesCS1A01G203200.1	Wheat	extracellular	21.85	20.92
TraesCS7A01G545800.1	Wheat	extracellular	22.59	20.27
TraesCS7A01G545900.1	Wheat	extracellular	22.96	20.06
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	23.33	19.63
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	22.22	18.58

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF12	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1A01G212000	EnsemblPlants:TraesCS1A01G212000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:-:374689661..374690656

Molecular Weight (calculated)

29139.4 Da

IEP (calculated)

6.980

GRAVY (calculated)

-0.181

Length

270 amino acids

Sequence
(BLAST)

001: MAGLLSVKAV ALAAVLAAAY ASCAAAEQPG AADLDASAVS YSSAWLPARA TWYGAPNGAG PDDNGGACGF KHVNQYPFSS MTSCGNQPLF KDGKGCGSCY
101: QIRCSGDKSC SGKIETVMIT DMNYYPVAQY HFDLSGTAFG ALAKPGLNEK LRHSGIIDIQ FRRVPCNFPG LKINFHVVDG SNAVYLAVLI EYEDMDGDVI
201: QVDMKEANSG SWTPMRESWG SIWRMDSNHR LQGPFSMRIT SDSGKKLVAN NVIPANWRPN TDYRSFVQFS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.