Factsheet for TraesCS3A01G480000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G474800.1	Wheat	extracellular	92.83	94.9
TraesCS3B01G524500.1	Wheat	extracellular	90.03	92.93
TraesCS3A01G479900.1	Wheat	extracellular	86.92	87.46
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	42.68	85.09
TraesCS6A01G217100.1	Wheat	extracellular	74.77	80.81
Os03t0102700-01	Rice	plastid	65.42	75.27
KXG40416	Sorghum	extracellular, vacuole	72.59	72.81
TraesCS3A01G011200.1	Wheat	cytosol	35.51	71.25
TraesCS3A01G011100.1	Wheat	extracellular	60.75	71.17
Zm00001d027283_P001	Maize	extracellular	68.22	68.87
TraesCS1A01G212300.1	Wheat	extracellular	56.39	66.06
TraesCS1A01G212400.1	Wheat	extracellular	53.27	64.53
TraesCS6A01G032700.1	Wheat	extracellular	54.52	64.1
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	66.98	62.87
TraesCS1A01G212000.1	Wheat	extracellular	51.4	61.11
TraesCS1A01G212200.1	Wheat	extracellular	50.47	59.78
TraesCS5A01G538000.1	Wheat	extracellular	52.65	59.51
TraesCS1A01G212600.1	Wheat	extracellular	50.78	58.63
TraesCS1A01G208200.1	Wheat	extracellular	45.17	54.72
TraesCS2A01G458900.1	Wheat	extracellular	44.86	54.34
TraesCS2A01G081200.1	Wheat	extracellular	40.19	50.79
TraesCS2A01G580300.1	Wheat	extracellular	38.94	50.2
TraesCS2A01G080800.1	Wheat	extracellular	39.25	49.61
TraesCS2A01G580200.1	Wheat	extracellular	38.32	49.0
GSMUA_AchrUn_...	Banana	extracellular	14.02	48.91
TraesCS5A01G530100.1	Wheat	extracellular	41.12	48.89
TraesCS2A01G413600.1	Wheat	extracellular	39.88	48.85
TraesCS5A01G530700.1	Wheat	extracellular	40.81	48.52
TraesCS2A01G413400.1	Wheat	extracellular	38.63	47.51
TraesCS6A01G249700.1	Wheat	extracellular	38.94	46.99
TraesCS2A01G105200.1	Wheat	extracellular	36.76	46.46
TraesCS6A01G249400.2	Wheat	extracellular	38.32	46.42
TraesCS6A01G249200.1	Wheat	extracellular	40.81	45.64
TraesCS6A01G249300.1	Wheat	extracellular	39.56	43.94
TraesCS3A01G488000.1	Wheat	extracellular	38.63	42.91
TraesCS2A01G413500.1	Wheat	extracellular, plastid	35.51	40.57
TraesCS6A01G235800.1	Wheat	extracellular	32.4	38.95
TraesCS2A01G373000.1	Wheat	extracellular	31.15	35.59
TraesCS5A01G498900.1	Wheat	extracellular	23.99	28.0
TraesCS5A01G499300.1	Wheat	nucleus	23.36	27.47
TraesCS5A01G499100.1	Wheat	extracellular	20.56	26.4
TraesCS5A01G499200.1	Wheat	extracellular	21.5	26.24
TraesCS1A01G203200.1	Wheat	extracellular	22.43	25.53
TraesCS7A01G545900.1	Wheat	extracellular	21.5	22.33
TraesCS7A01G545800.1	Wheat	extracellular	20.87	22.26
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	20.25	20.25
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	20.25	20.12

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G480000	EnsemblPlants:TraesCS3A01G480000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:+:711217788..711218840

Molecular Weight (calculated)

33336.0 Da

IEP (calculated)

5.275

GRAVY (calculated)

-0.260

Length

321 amino acids

Sequence
(BLAST)

001: MAATSSSSDA VAVAFLCLLA ANGCCGCPGP APAPTPTPTR APATPSPVPV TPPPAPAPPS PVPVTPPPVP ATPSPGSGSG SGSTNSSSGG WLDARATWYG
101: APDGAGPDDN GGACGFKNVN LPPFNAMTSC GNEPLFKDGK GCGSCYQIRC VGKAHPACSG VPETVIITDM NYYPVARYHF DLSGTAFGAM AKDGRNDELR
201: HAGIIDMQFK RVPCQYPGLS VTFHVEKGSN PNYLAILVEY ANGDGDVAQV DLMDGGEPTG AWRPMRHSWG SIWRLDTRRP LRGPFSLRVT NGSGRSLVAD
301: QVIPADWQAD AVYSSDVQFD D

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.