Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G327100.1 | Wheat | golgi | 86.0 | 79.34 |
| TraesCS4D01G323800.2 | Wheat | extracellular | 90.4 | 74.83 |
| TraesCS5A01G499200.1 | Wheat | extracellular | 77.6 | 73.76 |
| TraesCS5A01G499300.1 | Wheat | nucleus | 79.6 | 72.89 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 78.4 | 65.55 |
| TraesCS5A01G498900.1 | Wheat | extracellular | 72.0 | 65.45 |
| EER95568 | Sorghum | extracellular | 67.6 | 62.59 |
| Os03t0132200-01 | Rice | extracellular, plastid | 67.2 | 60.22 |
| Zm00001d048344_P002 | Maize | extracellular | 65.6 | 59.85 |
| Zm00001d027520_P001 | Maize | extracellular | 66.4 | 59.71 |
| TraesCS1A01G203200.1 | Wheat | extracellular | 60.8 | 53.9 |
| GSMUA_Achr5P11590_001 | Banana | extracellular | 54.8 | 52.49 |
| PGSC0003DMT400047948 | Potato | extracellular | 54.4 | 52.31 |
| GSMUA_Achr11P... | Banana | extracellular | 55.6 | 52.26 |
| GSMUA_Achr5P19030_001 | Banana | extracellular | 54.8 | 51.89 |
| Solyc01g112000.2.1 | Tomato | extracellular | 53.6 | 51.34 |
| VIT_03s0038g03430.t01 | Wine grape | extracellular | 52.4 | 50.58 |
| GSMUA_AchrUn_... | Banana | extracellular | 37.2 | 49.47 |
| GSMUA_Achr11P... | Banana | extracellular | 52.0 | 49.06 |
| KRH29091 | Soybean | extracellular | 50.4 | 48.65 |
| KRH24119 | Soybean | extracellular | 49.2 | 47.13 |
| CDY69288 | Canola | extracellular | 49.2 | 46.59 |
| Bra033563.1-P | Field mustard | extracellular | 49.2 | 46.59 |
| AT4G38400.1 | Thale cress | extracellular | 49.2 | 46.42 |
| AT3G45970.1 | Thale cress | extracellular | 48.8 | 46.04 |
| CDY64278 | Canola | extracellular | 48.8 | 46.04 |
| CDY61895 | Canola | extracellular | 49.2 | 45.72 |
| Bra011899.1-P | Field mustard | extracellular | 49.2 | 45.72 |
| CDY72634 | Canola | extracellular | 48.4 | 45.66 |
| CDY52801 | Canola | extracellular | 48.8 | 45.35 |
| AT3G45960.2 | Thale cress | extracellular | 47.2 | 44.87 |
| GSMUA_Achr1P02170_001 | Banana | extracellular, peroxisome, plastid | 54.8 | 44.63 |
| TraesCS7A01G545900.1 | Wheat | extracellular | 44.0 | 35.6 |
| TraesCS7A01G545800.1 | Wheat | extracellular | 42.0 | 34.88 |
| TraesCS7A01G546000.1 | Wheat | endoplasmic reticulum, extracellular | 42.4 | 32.82 |
| TraesCS7A01G546300.1 | Wheat | endoplasmic reticulum, extracellular | 42.0 | 32.71 |
| TraesCS5A01G537300.1 | Wheat | cytosol, extracellular, plastid | 20.0 | 31.06 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 29.2 | 29.32 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 28.4 | 28.29 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 28.0 | 27.56 |
| TraesCS2A01G413400.1 | Wheat | extracellular | 28.4 | 27.2 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 28.4 | 27.1 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 27.6 | 26.04 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 26.4 | 25.98 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 26.4 | 25.98 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 27.6 | 25.94 |
| TraesCS3A01G011200.1 | Wheat | cytosol | 16.0 | 25.0 |
| TraesCS2A01G413500.1 | Wheat | extracellular, plastid | 27.6 | 24.56 |
| TraesCS6A01G249200.1 | Wheat | extracellular | 27.6 | 24.04 |
| TraesCS6A01G235800.1 | Wheat | extracellular | 25.6 | 23.97 |
| TraesCS3A01G488000.1 | Wheat | extracellular | 26.8 | 23.18 |
| TraesCS6A01G249300.1 | Wheat | extracellular | 26.8 | 23.18 |
| TraesCS1A01G212400.1 | Wheat | extracellular | 24.4 | 23.02 |
| TraesCS1A01G212300.1 | Wheat | extracellular | 24.8 | 22.63 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 25.2 | 22.42 |
| TraesCS2A01G458900.1 | Wheat | extracellular | 23.6 | 22.26 |
| TraesCS6A01G217100.1 | Wheat | extracellular | 26.4 | 22.22 |
| TraesCS1A01G212600.1 | Wheat | extracellular | 24.4 | 21.94 |
| TraesCS3A01G011100.1 | Wheat | extracellular | 24.0 | 21.9 |
| TraesCS1A01G208200.1 | Wheat | extracellular | 23.2 | 21.89 |
| TraesCS1A01G212000.1 | Wheat | extracellular | 23.6 | 21.85 |
| TraesCS5A01G538000.1 | Wheat | extracellular | 24.4 | 21.48 |
| TraesCS6A01G032700.1 | Wheat | extracellular | 23.2 | 21.25 |
| TraesCS3A01G479900.1 | Wheat | extracellular | 26.8 | 21.0 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 22.4 | 20.74 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 22.4 | 20.74 |
| TraesCS1A01G212200.1 | Wheat | extracellular | 22.4 | 20.66 |
| TraesCS3A01G480000.1 | Wheat | extracellular | 26.4 | 20.56 |
| TraesCS5A01G073100.1 | Wheat | extracellular, plasma membrane | 25.2 | 18.42 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.2 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF4 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS5A01G499100 | EnsemblPlants:TraesCS5A01G499100.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5A:+:665891961..665893008
Molecular Weight (calculated)
26630.8 Da
IEP (calculated)
5.063
GRAVY (calculated)
0.104
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCFYFLPIH GPCMILIVRL WCLAAGCCGY GAAAASLNGD LLAGAGPALY RQGVGCGACF QVRCKDEELC ATAGVKVVVT DRARTKTNDT DLVLSSPAFA
101: AMARPGMAGR LAKLGAVDVE YKRVPCVYEG KNLSLRVDER SRAPSELAIT ILYQGGQTDI VEVDVAQVGS SSSWTSLTRD HGPAWSTSEA PPGPLQLRAV
201: VTSGFDGAWV YAEHEVLPSQ WHAGEVYDTG VQITAIAQEA CLPCDTQEWK
101: AMARPGMAGR LAKLGAVDVE YKRVPCVYEG KNLSLRVDER SRAPSELAIT ILYQGGQTDI VEVDVAQVGS SSSWTSLTRD HGPAWSTSEA PPGPLQLRAV
201: VTSGFDGAWV YAEHEVLPSQ WHAGEVYDTG VQITAIAQEA CLPCDTQEWK
001: MATSFFAGHI AAAIPSIYKD GAGCGACFQV RCKNPKLCNS KGTIVMVTDL NTSNQTDLVL SSRAFRAMAK PVVGVDKYLL KQGIVDVEYQ RVPCNYGKRN
101: LNVRVEEASK KPNYLAIKLL YQGGQTEVVG IDIAPVGSSQ WSYMSRSHGA VWATDKVPTG ALQFKFTVTG GYDGKTVWSK RVLPANWNSG RIYDAGVQIT
201: DIAQEGCDTC GHIWN
101: LNVRVEEASK KPNYLAIKLL YQGGQTEVVG IDIAPVGSSQ WSYMSRSHGA VWATDKVPTG ALQFKFTVTG GYDGKTVWSK RVLPANWNSG RIYDAGVQIT
201: DIAQEGCDTC GHIWN
Arabidopsis Description
EXLA3Expansin-like A3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.