Factsheet for VIT_03s0038g03430.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29091	Soybean	extracellular	72.97	72.97
KRH24119	Soybean	extracellular	73.36	72.8
PGSC0003DMT400047948	Potato	extracellular	69.11	68.85
Solyc01g112000.2.1	Tomato	extracellular	68.34	67.82
Bra011899.1-P	Field mustard	extracellular	65.64	63.2
CDY61895	Canola	extracellular	65.64	63.2
CDY52801	Canola	extracellular	65.25	62.83
GSMUA_Achr5P19030_001	Banana	extracellular	63.71	62.5
GSMUA_Achr11P...	Banana	extracellular	64.09	62.41
AT3G45960.2	Thale cress	extracellular	63.32	62.36
AT4G38400.1	Thale cress	extracellular	63.71	62.26
AT3G45970.1	Thale cress	extracellular	62.93	61.51
Bra033563.1-P	Field mustard	extracellular	62.55	61.36
CDY69288	Canola	extracellular	62.55	61.36
GSMUA_Achr5P11590_001	Banana	extracellular	61.0	60.54
CDY72634	Canola	extracellular	61.78	60.38
CDY64278	Canola	extracellular	61.78	60.38
GSMUA_Achr11P...	Banana	extracellular	59.46	58.11
TraesCS4B01G326900.1	Wheat	extracellular	57.92	54.55
EER95568	Sorghum	extracellular	56.76	54.44
TraesCS5A01G498900.1	Wheat	extracellular	57.53	54.18
Os10t0542400-01	Rice	extracellular	57.53	54.18
TraesCS4D01G324000.1	Wheat	extracellular	56.76	53.85
TraesCS4D01G323600.1	Wheat	extracellular	57.53	53.79
TraesCS4B01G327200.1	Wheat	extracellular	55.6	53.73
GSMUA_AchrUn_...	Banana	extracellular	39.0	53.72
HORVU4Hr1G081990.2	Barley	extracellular	57.53	53.21
TraesCS5A01G499300.1	Wheat	nucleus	55.98	53.11
TraesCS4D01G323900.1	Wheat	golgi	55.21	52.77
TraesCS5A01G499100.1	Wheat	extracellular	50.58	52.4
Zm00001d048344_P002	Maize	extracellular	55.21	52.19
Zm00001d027520_P001	Maize	extracellular	55.98	52.16
TraesCS4B01G327100.1	Wheat	golgi	54.44	52.03
Zm00001d029783_P003	Maize	extracellular	54.44	51.27
TraesCS1B01G217200.1	Wheat	extracellular	54.05	50.91
Os03t0132200-01	Rice	extracellular, plastid	54.83	50.9
TraesCS5A01G499200.1	Wheat	extracellular	51.35	50.57
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	59.85	50.49
KXG38992	Sorghum	extracellular	54.83	50.35
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	57.53	49.83
HORVU1Hr1G052290.4	Barley	extracellular	53.28	49.82
TraesCS1A01G203200.1	Wheat	extracellular	53.28	48.94
Os07t0475400-01	Rice	extracellular	52.12	48.91
TraesCS1D01G206700.1	Wheat	extracellular	53.28	48.76
EER99370	Sorghum	extracellular	51.35	48.54
Zm00001d006360_P001	Maize	extracellular	49.42	47.06
TraesCS4D01G323800.2	Wheat	extracellular	54.05	46.36
VIT_02s0012g00830.t01	Wine grape	extracellular	37.07	37.65
VIT_00s1455g00010.t01	Wine grape	extracellular	34.75	35.86
VIT_00s0309g00050.t01	Wine grape	extracellular	34.75	35.86
VIT_00s0309g00090.t01	Wine grape	extracellular	34.36	35.46
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	42.08	35.28
TraesCS7A01G545900.1	Wheat	extracellular	41.7	34.95
TraesCS7D01G532200.1	Wheat	extracellular	40.93	34.3
TraesCS7A01G545800.1	Wheat	extracellular	39.77	34.22
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	41.31	33.86
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	39.77	33.44
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	40.15	32.91
TraesCS7D01G532400.1	Wheat	extracellular	39.0	32.79
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	40.15	32.6
Os06t0725300-01	Rice	endoplasmic reticulum	39.38	32.59
TraesCS7D01G532500.1	Wheat	extracellular	40.15	32.4
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	40.15	32.4
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	38.61	31.95
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	39.77	31.89
VIT_15s0021g02670.t01	Wine grape	extracellular	32.82	31.14
TraesCSU01G099100.1	Wheat	extracellular, golgi	37.45	31.09
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	37.45	30.41
VIT_15s0021g02700.t01	Wine grape	extracellular	30.5	28.94
VIT_12s0059g00190.t01	Wine grape	extracellular	26.25	26.25
KXG20919	Sorghum	plastid	40.54	23.7
VIT_09s0002g08510.t01	Wine grape	extracellular	25.48	23.66
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.15	16.15

Protein Annotations

EntrezGene:100258952	wikigene:100258952	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.2	EMBL:AM474572
ProteinID:CAN79420	ProteinID:CAN79420.1	ProteinID:CBI37780	ProteinID:CBI37780.3	UniProt:D7U4W1	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EMBL:FN596508	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	EntrezGene:LOC100258952	wikigene:LOC100258952	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF4
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TIGR:TC54149
UniParc:UPI00015C88AD	ArrayExpress:VIT_03s0038g03430	EnsemblPlantsGene:VIT_03s0038g03430	EnsemblPlants:VIT_03s0038g03430.t01	unigene:Vvi.6750	RefSeq:XP_002281851
RefSeq:XP_002281851.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:2487023..2488683

Molecular Weight (calculated)

28444.1 Da

IEP (calculated)

8.333

GRAVY (calculated)

-0.024

Length

259 amino acids

Sequence
(BLAST)

001: MAIFLCFLFF LISSATACDR CVHHTKVAYF SKASALSSGA CGYGSLALGF YGGHLAAGVP SLFKDGAGCG ACFQIRCKNT TLCSRAGTTV ILTDLNRNNQ
101: TDFVLSSRAF TAMANKGMGQ QILKLGLVDV EYKRVLCNYN KQNLAIRVEE MSQKPHYLAI KVLYQGGQTE IVGMDVAQVD SSRWTYMTRN YGAIWDTSNV
201: PSGPLQLRFV VTGGYDGKWV WAKKVLPADW KVGETYDAGV QISDIAQEPC YPCDNENWK

Best Arabidopsis Sequence Match ( AT4G38400.1 )
(BLAST)

001: MLQGFLFLLS VVLLFSSSAA ACDRCLHSSK AAYFSSASAL SSGACAYGSM ATGFFAGHIA AALPSIYKDG SGCGACFQVR CKNPTLCSSK GTTVIVTDLN
101: KTNQTDLVLS SRAFRAMAKP VVGADRDLLK QGIVDIEYRR VPCDYGNKKM NVRVEESSKN PNYLAIKLLY QGGQTEVVAI YIAQVGSSHW SYMTRSHGAV
201: WVTDKVPNGA LQFRFVVTAG YDGKMVWSQR VLPANWEAGK SYDAGVQITD IAQEGCDPCD DHIWN

Arabidopsis Description

EXLA2Expansin-like A2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.