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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:extracellular
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014826_P001 Maize endoplasmic reticulum, extracellular, vacuole 55.3 76.8
Os06t0725300-01 Rice endoplasmic reticulum 37.02 52.4
TraesCS7A01G545800.1 Wheat extracellular 34.99 51.49
TraesCS7A01G545900.1 Wheat extracellular 35.89 51.46
TraesCS7D01G532500.1 Wheat extracellular 37.02 51.09
HORVU7Hr1G119340.3 Barley extracellular, golgi, plastid 35.21 50.49
TraesCS7A01G546300.1 Wheat endoplasmic reticulum, extracellular 36.57 50.47
TraesCS7B01G469200.1 Wheat endoplasmic reticulum, extracellular 36.12 50.16
TraesCS7B01G468700.1 Wheat endoplasmic reticulum, extracellular 35.67 50.0
TraesCSU01G099200.1 Wheat endoplasmic reticulum, extracellular 34.76 50.0
TraesCS7D01G532200.1 Wheat extracellular 34.76 49.84
HORVU7Hr1G119200.1 Barley golgi, plastid, vacuole 35.21 49.37
HORVU7Hr1G119220.1 Barley extracellular, golgi, plastid 34.76 49.2
TraesCSU01G099100.1 Wheat extracellular, golgi 34.54 49.04
TraesCS7A01G546000.1 Wheat endoplasmic reticulum, extracellular 35.67 48.92
TraesCS7D01G532400.1 Wheat extracellular 33.63 48.38
EER99370 Sorghum extracellular 28.44 45.99
EER95568 Sorghum extracellular 27.31 44.81
KRH29091 Soybean extracellular 25.96 44.4
GSMUA_Achr11P... Banana extracellular 26.64 44.36
KRH24119 Soybean extracellular 25.96 44.06
KXG38992 Sorghum extracellular 27.54 43.26
GSMUA_Achr11P... Banana extracellular 25.28 42.26
GSMUA_Achr5P11590_001 Banana extracellular 24.61 41.76
GSMUA_Achr5P19030_001 Banana extracellular 24.83 41.67
GSMUA_AchrUn_... Banana extracellular 17.38 40.96
VIT_03s0038g03430.t01 Wine grape extracellular 23.7 40.54
Bra033563.1-P Field mustard extracellular 23.93 40.15
CDY69288 Canola extracellular 23.93 40.15
CDY52801 Canola extracellular 24.38 40.15
PGSC0003DMT400047948 Potato extracellular 23.48 40.0
Solyc01g112000.2.1 Tomato extracellular 23.48 39.85
Bra011899.1-P Field mustard extracellular 24.15 39.78
CDY61895 Canola extracellular 24.15 39.78
CDY64278 Canola extracellular 23.7 39.62
CDY72634 Canola extracellular 23.7 39.62
AT4G38400.1 Thale cress extracellular 23.25 38.87
AT3G45960.2 Thale cress extracellular 22.57 38.02
AT3G45970.1 Thale cress extracellular 21.9 36.6
GSMUA_Achr1P02170_001 Banana extracellular, peroxisome, plastid 25.28 36.48
EER88254 Sorghum extracellular 15.35 26.25
KXG19818 Sorghum extracellular 15.12 25.87
EES05488 Sorghum extracellular 15.12 24.54
OQU93456 Sorghum cytosol, extracellular 11.74 24.53
EES11234 Sorghum extracellular 14.22 23.95
OQU89980 Sorghum extracellular, plasma membrane, vacuole 11.96 23.56
TraesCS7B01G469100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 34.09 23.45
EES07509 Sorghum extracellular 13.77 23.11
EES11235 Sorghum extracellular 14.9 22.68
EER91948 Sorghum extracellular 14.22 22.66
EER91942 Sorghum extracellular 13.54 22.56
EES11233 Sorghum extracellular 14.45 22.22
EER93754 Sorghum extracellular 14.9 21.57
EER91947 Sorghum extracellular 13.09 21.56
EER98447 Sorghum extracellular 14.9 21.5
EES07508 Sorghum extracellular 14.22 21.43
EER94500 Sorghum extracellular 14.0 21.38
KXG37946 Sorghum extracellular 15.58 21.23
OQU93455 Sorghum extracellular 12.19 21.09
EER94537 Sorghum extracellular 12.64 21.05
EER95684 Sorghum extracellular 12.64 21.05
KXG38969 Sorghum extracellular 12.64 21.05
KXG38972 Sorghum extracellular 12.64 21.05
EES05780 Sorghum extracellular 14.0 21.02
OQU93457 Sorghum extracellular 12.42 20.68
OQU93458 Sorghum extracellular 12.42 20.68
OQU93459 Sorghum extracellular 12.42 20.68
EER95683 Sorghum extracellular 12.42 20.68
OQU92156 Sorghum plastid 15.12 20.62
OQU92157 Sorghum extracellular 14.22 20.45
KXG40417 Sorghum mitochondrion 13.54 20.2
KXG40416 Sorghum extracellular, vacuole 14.45 20.0
EER91945 Sorghum extracellular 12.42 19.93
KXG38933 Sorghum mitochondrion 14.22 19.75
EER98449 Sorghum extracellular 13.77 19.55
EES05315 Sorghum extracellular 14.0 19.5
EER94506 Sorghum extracellular 11.96 18.79
EER91949 Sorghum extracellular 11.96 18.79
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1UniProt:A0A194YLQ5InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0005575GO:GO:0005576InterPro:IPR007112InterPro:IPR007117
InterPro:IPR036749InterPro:IPR036908EnsemblPlants:KXG20919ProteinID:KXG20919ProteinID:KXG20919.1PFAM:PF01357
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF25InterPro:RlpA-like_sf
EnsemblPlantsGene:SORBI_3010G271000SUPFAM:SSF49590SUPFAM:SSF50685UniParc:UPI0007F1B746SEG:seg:
Description
hypothetical protein
Coordinates
chr10:+:60503934..60506087
Molecular Weight (calculated)
47311.0 Da
IEP (calculated)
9.044
GRAVY (calculated)
-0.016
Length
443 amino acids
Sequence
(BLAST)
001: MDATAILFIL ATHAQLLNCP SHQRRRVPRI CPAFFSMHST HAAPFILNFS RWLAYPCVDD LSSLHCCPHV ALLCCSSPLA ANSITVARCS PARPAAVSYP
101: SPPRRRAEQA TLPAGGSNSD PLRQSIMLLS VVLLRLLATG GLIIFLLCPA SCLAPRRRRP PPPPSINDDG NYYCDWCPRH STASADLDAL LRGNGGGACG
201: YAAAELDRGA PHVAAAGADF FFRDGAGCGA CYQLRCRDRR VCGDGGVKVV VVAGAANRTG FLLTREAFAA MAKPGMSSDD QLLPGLGGNA VQVDFRRIPC
301: EYKNKNLSVR VEEEWSRHPA HLAISFLYQG GQTDIAAVEI AHAAADAPAP APSWRSMARV PRRGAVTWRT SRAPAGPLQL RLVVTAGVGG KWLRAGGDVL
401: PADWRPGQVH DTGLRVHDVA LSTCARSCLA RRPPVVAGSQ ELR
Best Arabidopsis Sequence Match ( AT3G45960.1 )
(BLAST)
001: MATSFFAGHI AAAIPSIYKD GAGCGACFQV RCKNPKLCNS KGTIVMVTDL NTSNQTDLVL SSRAFRAMAK PVVGVDKYLL KQGIVDVEYQ RVPCNYGKRN
101: LNVRVEEASK KPNYLAIKLL YQGGQTEVVG IDIAPVGSSQ WSYMSRSHGA VWATDKVPTG ALQFKFTVTG GYDGKTVWSK RVLPANWNSG RIYDAGVQIT
201: DIAQEGCDTC GHIWN
Arabidopsis Description
EXLA3Expansin-like A3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.