Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047093_P001 | Maize | extracellular | 90.33 | 92.05 |
| TraesCS1D01G215300.1 | Wheat | extracellular | 68.77 | 67.52 |
| TraesCS1A01G212300.1 | Wheat | extracellular | 68.77 | 67.52 |
| EER91945 | Sorghum | extracellular | 67.66 | 65.94 |
| EER91942 | Sorghum | extracellular | 62.45 | 63.16 |
| EER94506 | Sorghum | extracellular | 65.06 | 62.06 |
| EER91949 | Sorghum | extracellular | 64.68 | 61.7 |
| TraesCS1B01G225900.1 | Wheat | extracellular, mitochondrion, plastid | 67.29 | 60.74 |
| EER94500 | Sorghum | extracellular | 65.06 | 60.34 |
| OQU92157 | Sorghum | extracellular | 64.68 | 56.49 |
| EER91948 | Sorghum | extracellular | 58.36 | 56.47 |
| KXG40416 | Sorghum | extracellular, vacuole | 66.17 | 55.62 |
| OQU92156 | Sorghum | plastid | 64.68 | 53.54 |
| KXG40417 | Sorghum | mitochondrion | 59.11 | 53.54 |
| EER94537 | Sorghum | extracellular | 52.42 | 53.01 |
| KXG38972 | Sorghum | extracellular | 52.42 | 53.01 |
| KXG38969 | Sorghum | extracellular | 52.04 | 52.63 |
| KXG38933 | Sorghum | mitochondrion | 62.08 | 52.35 |
| EES05315 | Sorghum | extracellular | 61.34 | 51.89 |
| OQU93456 | Sorghum | cytosol, extracellular | 40.52 | 51.42 |
| GSMUA_AchrUn_... | Banana | extracellular | 17.1 | 50.0 |
| OQU93455 | Sorghum | extracellular | 45.72 | 48.05 |
| EER88254 | Sorghum | extracellular | 44.24 | 45.95 |
| KXG19818 | Sorghum | extracellular | 44.24 | 45.95 |
| EER95684 | Sorghum | extracellular | 45.35 | 45.86 |
| OQU93459 | Sorghum | extracellular | 45.35 | 45.86 |
| EES07509 | Sorghum | extracellular | 44.98 | 45.83 |
| EER95683 | Sorghum | extracellular | 44.98 | 45.49 |
| OQU93458 | Sorghum | extracellular | 44.98 | 45.49 |
| OQU93457 | Sorghum | extracellular | 44.98 | 45.49 |
| EES11234 | Sorghum | extracellular | 43.87 | 44.87 |
| EES11235 | Sorghum | extracellular | 48.33 | 44.67 |
| EES07508 | Sorghum | extracellular | 46.1 | 42.18 |
| EES05780 | Sorghum | extracellular | 45.72 | 41.69 |
| EES11233 | Sorghum | extracellular | 44.24 | 41.32 |
| EER98449 | Sorghum | extracellular | 44.98 | 38.78 |
| EER98447 | Sorghum | extracellular | 43.49 | 38.11 |
| EES05488 | Sorghum | extracellular | 37.92 | 37.36 |
| EER93754 | Sorghum | extracellular | 41.64 | 36.6 |
| KXG37946 | Sorghum | extracellular | 41.26 | 34.15 |
| EER95568 | Sorghum | extracellular | 25.65 | 25.56 |
| EER99370 | Sorghum | extracellular | 24.91 | 24.45 |
| KXG38992 | Sorghum | extracellular | 23.05 | 21.99 |
| OQU89980 | Sorghum | extracellular, plasma membrane, vacuole | 18.22 | 21.78 |
| KXG20919 | Sorghum | plastid | 21.56 | 13.09 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:8058094 | UniProt:C5WSF6 | EnsemblPlants:EER91947 |
| ProteinID:EER91947 | ProteinID:EER91947.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF19 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | EnsemblPlantsGene:SORBI_3001G301300 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| unigene:Sbi.19266 | SignalP:SignalP-noTM | UniParc:UPI0001A824C1 | RefSeq:XP_002464949.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:58289455..58290954
Molecular Weight (calculated)
28921.7 Da
IEP (calculated)
9.825
GRAVY (calculated)
-0.149
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAVISISS KVAALAALFV VLAMSAEAAS PNGGWLAAKA TWYGAPNGAG PDDNGGACGF KNTNQYPYMS MTSCGNEPLF KDGKGCGACY QIRCLNSTHD
101: ACSGRAKRVI ITDMNYYPVS KYHFDLSGTA FGAMAKTGLN DKLRHAGIID IQFRRVPCNY KGLSVNFRVQ VGSNPNYFAV LVQYAGKDGA VVQLDLMETS
201: KATGKPTGVW TPMRVSWGAV WRLDTKRPLQ PPFSLRVRNG SGKTLVASNV IPANWKPMTD YPSNVQFPN
101: ACSGRAKRVI ITDMNYYPVS KYHFDLSGTA FGAMAKTGLN DKLRHAGIID IQFRRVPCNY KGLSVNFRVQ VGSNPNYFAV LVQYAGKDGA VVQLDLMETS
201: KATGKPTGVW TPMRVSWGAV WRLDTKRPLQ PPFSLRVRNG SGKTLVASNV IPANWKPMTD YPSNVQFPN
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.