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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plastid
Any Predictor:extracellular, mitochondrion, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G212300.1 Wheat extracellular 88.59 96.35
TraesCS1D01G215300.1 Wheat extracellular 88.25 95.99
Os10t0555700-02 Rice extracellular 63.42 72.41
TraesCS6B01G046100.1 Wheat extracellular 63.76 69.6
TraesCS6B01G046200.1 Wheat extracellular 63.76 69.6
TraesCS6B01G046300.1 Wheat extracellular 63.76 69.6
TraesCS6B01G046400.1 Wheat extracellular 63.76 69.6
TraesCS6B01G046000.1 Wheat extracellular 63.76 69.6
Zm00001d047093_P001 Maize extracellular 60.4 68.18
EER91947 Sorghum extracellular 60.74 67.29
Zm00001d029907_P001 Maize extracellular 61.07 66.67
EER91945 Sorghum extracellular 61.41 66.3
Zm00001d047091_P001 Maize extracellular 60.4 65.93
TraesCS1B01G226000.2 Wheat extracellular 59.06 65.19
TraesCS1B01G225800.1 Wheat extracellular 58.72 64.58
TraesCS3B01G014400.1 Wheat cytosol 52.35 62.9
TraesCS3B01G014300.1 Wheat extracellular, nucleus 57.72 62.77
TraesCS6B01G245700.1 Wheat extracellular 59.4 59.8
TraesCS1B01G225700.1 Wheat extracellular 58.39 57.62
TraesCS3B01G526800.1 Wheat extracellular 57.72 57.33
TraesCS4B01G375200.1 Wheat extracellular 55.37 56.51
Zm00001d047094_P001 Maize extracellular 52.68 56.27
TraesCS3B01G524500.1 Wheat extracellular 58.39 55.95
TraesCS1B01G222300.1 Wheat extracellular 49.33 55.47
TraesCS1B01G226100.1 Wheat extracellular 55.7 53.21
TraesCS2B01G480700.1 Wheat extracellular 46.64 52.45
EER91948 Sorghum extracellular 48.66 52.16
TraesCS4B01G375600.1 Wheat extracellular 57.05 49.85
TraesCS5B01G079400.1 Wheat extracellular, plasma membrane 56.71 49.56
TraesCS2B01G432300.1 Wheat plastid 43.29 49.24
TraesCS4B01G362100.1 Wheat extracellular 43.62 48.15
TraesCS4B01G362500.1 Wheat extracellular 43.29 47.78
TraesCS4B01G362600.1 Wheat extracellular, unclear 43.29 47.78
TraesCS2B01G095600.1 Wheat extracellular 40.6 47.45
TraesCS2B01G607400.1 Wheat extracellular 38.93 46.59
TraesCS2B01G095700.1 Wheat extracellular 38.59 45.63
TraesCS2B01G432100.1 Wheat extracellular 38.93 44.44
TraesCS3B01G535800.1 Wheat extracellular 42.28 43.6
TraesCS6B01G275800.1 Wheat extracellular 41.95 43.55
TraesCS2B01G122100.1 Wheat extracellular 27.18 42.41
GSMUA_AchrUn_... Banana extracellular 13.09 42.39
TraesCS6B01G275700.1 Wheat extracellular 40.94 42.21
TraesCS2B01G432200.1 Wheat extracellular, plastid 38.93 41.28
TraesCS5B01G376500.1 Wheat extracellular 40.6 39.16
TraesCS6B01G264400.1 Wheat extracellular 32.89 36.57
TraesCS2B01G390000.1 Wheat extracellular 31.88 33.81
TraesCS4B01G327100.1 Wheat golgi 24.83 27.31
TraesCS4B01G327200.1 Wheat extracellular 24.5 27.24
TraesCS4B01G326900.1 Wheat extracellular 24.16 26.18
TraesCS1B01G217200.1 Wheat extracellular 21.48 23.27
TraesCS7B01G468700.1 Wheat endoplasmic reticulum, extracellular 19.46 18.35
TraesCS7B01G469200.1 Wheat endoplasmic reticulum, extracellular 19.46 18.18
TraesCS7B01G469100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 19.46 9.01
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBD
InterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357
PFAM:PF03330PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692
PANTHER:PTHR31692:SF19InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685
TMHMM:TMhelixEnsemblPlantsGene:TraesCS1B01G225900EnsemblPlants:TraesCS1B01G225900.1SEG:seg::
Description
No Description!
Coordinates
chr1B:-:405710632..405711945
Molecular Weight (calculated)
32782.3 Da
IEP (calculated)
9.663
GRAVY (calculated)
-0.295
Length
298 amino acids
Sequence
(BLAST)
001: MPTRLAIRPQ LPSYLTSTTG YSASMAGVST NAVALVALVF VLLTYGCCAQ SPLNYTGSLA KASKASWSWL PAKATWYGAP TGAGPDDNGG ACGYKHTNQY
101: PFMSMTSCGN EPLFKDGMGC GACYRIRCVN NKACSGKPET VMITDMNYYP VAKYHFDLSG TAFGAMAKPG QNDKLRHAGI IDIQFQRVPC NHLGLNMNFH
201: VERGSNPNYL AVLVEFANRE GTVVQMDIME SRNGRPTGYW TALRHSWGAI WRMDSSRRLQ GPFSLRIRSE SGKTLVAKQV IPANWKPDTN YRSNVQFR
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.