Factsheet for TraesCS3B01G014400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G000400.1	Wheat	cytosol	73.39	89.66
TraesCS3A01G011200.1	Wheat	cytosol	56.85	88.12
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	79.44	71.9
Os03t0102700-01	Rice	plastid	74.19	65.95
TraesCS6B01G245700.1	Wheat	extracellular	73.79	61.82
TraesCS1B01G226000.2	Wheat	extracellular	64.52	59.26
TraesCS4B01G375600.1	Wheat	extracellular	80.24	58.36
TraesCS3B01G526800.1	Wheat	extracellular	70.56	58.33
TraesCS6B01G046000.1	Wheat	extracellular	63.31	57.51
TraesCS3B01G524500.1	Wheat	extracellular	71.77	57.23
TraesCS6B01G046400.1	Wheat	extracellular	62.9	57.14
TraesCS6B01G046300.1	Wheat	extracellular	62.9	57.14
TraesCS6B01G046200.1	Wheat	extracellular	62.9	57.14
TraesCS6B01G046100.1	Wheat	extracellular	62.5	56.78
KXG40416	Sorghum	extracellular, vacuole	71.77	55.62
Zm00001d027283_P001	Maize	extracellular	70.16	54.72
TraesCS1B01G225800.1	Wheat	extracellular	58.06	53.14
TraesCS4B01G375200.1	Wheat	extracellular	62.5	53.08
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	62.9	52.35
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	70.56	51.32
TraesCS1B01G225700.1	Wheat	extracellular	60.89	50.0
TraesCS1B01G222300.1	Wheat	extracellular	50.81	47.55
TraesCS1B01G226100.1	Wheat	extracellular	58.87	46.79
TraesCS2B01G480700.1	Wheat	extracellular	49.6	46.42
TraesCS2B01G095600.1	Wheat	extracellular	46.77	45.49
TraesCS2B01G432300.1	Wheat	plastid	47.18	44.66
TraesCS4B01G362100.1	Wheat	extracellular	47.98	44.07
TraesCS4B01G362500.1	Wheat	extracellular	47.98	44.07
TraesCS4B01G362600.1	Wheat	extracellular, unclear	47.98	44.07
TraesCS2B01G607400.1	Wheat	extracellular	43.95	43.78
TraesCS2B01G432100.1	Wheat	extracellular	43.55	41.38
TraesCS2B01G095700.1	Wheat	extracellular	41.53	40.87
TraesCS2B01G122100.1	Wheat	extracellular	30.65	39.79
TraesCS2B01G432200.1	Wheat	extracellular, plastid	43.15	38.08
TraesCS3B01G535800.1	Wheat	extracellular	43.95	37.72
TraesCS6B01G275700.1	Wheat	extracellular	43.95	37.72
TraesCS6B01G275800.1	Wheat	extracellular	43.15	37.28
GSMUA_AchrUn_...	Banana	extracellular	13.31	35.87
TraesCS5B01G376500.1	Wheat	extracellular	44.35	35.6
TraesCS6B01G264400.1	Wheat	extracellular	37.1	34.33
TraesCS2B01G390000.1	Wheat	extracellular	36.29	32.03
TraesCS1B01G217200.1	Wheat	extracellular	23.39	21.09
TraesCS4B01G327200.1	Wheat	extracellular	22.58	20.9
TraesCS4B01G326900.1	Wheat	extracellular	22.98	20.73
TraesCS4B01G327100.1	Wheat	golgi	22.18	20.3
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	21.37	16.77
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	20.16	15.67
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	19.76	7.61

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
EnsemblPlantsGene:TraesCS3B01G014400	EnsemblPlants:TraesCS3B01G014400.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:6126328..6127544

Molecular Weight (calculated)

26979.1 Da

IEP (calculated)

6.656

GRAVY (calculated)

-0.363

Length

248 amino acids

Sequence
(BLAST)

001: MATPPAANSS WLDAKATWYG ARHGAGPDDN GGACGFKNVN LPPFSAMTSC SNEPLFKDGK GCGSCYQIRC LRSNHPACSG VPETVIITDM NYYPVSPYHF
101: DLSGTAFGAM AKGGRNDELR NAGIIDMQFR RVPCQYPGLA VMFHVEKGSN PFYMAILVEY ENGDGDVKLL EIMESRPDAG NSSEMAPTGE WMPMKESWGS
201: IWRMDARHRM QGPFSLRITN ESGKMLVADQ VISGSLKKST APSSSLIN

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.